RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 RPS4Y2Q8TD47 263 aa13.35□□□□□ -0.27
CTTN-215ENST00000533931 CMBLQ96DG6 245 aa13.35□□□□□ -0.27
CTTN-215ENST00000533931 REEP6Q96HR9 211 aa13.35□□□□□ -0.27
CTTN-215ENST00000533931 LURAP1Q96LR2 239 aa13.35□□□□□ -0.27
CTTN-215ENST00000533931 MS4A5Q9H3V2 200 aa13.35□□□□□ -0.27
CTTN-215ENST00000533931 POFUT1Q9H488 388 aa13.35□□□□□ -0.27
CTTN-215ENST00000533931 CXorf56Q9H5V9 222 aa13.35□□□□□ -0.27
CTTN-215ENST00000533931 ISG20L2Q9H9L3 353 aaKnown RBP13.35□□□□□ -0.27
CTTN-215ENST00000533931 ZNF319Q9P2F9 582 aa13.35□□□□□ -0.27
CTTN-215ENST00000533931 ERVK-18Q9QC07 812 aa13.35□□□□□ -0.27
CTTN-215ENST00000533931 CLEC2DQ9UHP7 191 aa13.35□□□□□ -0.27
CTTN-215ENST00000533931 DUSP13Q9UII6 198 aa13.35□□□□□ -0.27
CTTN-215ENST00000533931 ST6GALNAC2Q9UJ37 374 aa13.35□□□□□ -0.27
CTTN-215ENST00000533931 PURGQ9UJV8 347 aaKnown RBP13.35□□□□□ -0.27
CTTN-215ENST00000533931 NOP16Q9Y3C1 178 aaKnown RBP13.35□□□□□ -0.27
CTTN-215ENST00000533931 PMF1-BGLAPU3KQ54 211 aa13.35□□□□□ -0.27
CTTN-215ENST00000533931 PLCE1Q9P212 2302 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 A0A1W2PPW3 197 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 M0R233 179 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 MTRF1O75570 445 aaKnown RBP13.34□□□□□ -0.27
CTTN-215ENST00000533931 RPP14O95059 124 aaKnown RBP13.34□□□□□ -0.27
CTTN-215ENST00000533931 TNFAIP8O95379 198 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 CD8AP01732 235 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 TTRP02766 147 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 ADH4P08319 380 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 ZNF12P17014 697 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 EEF1B2P24534 225 aaKnown RBP13.34□□□□□ -0.27
CTTN-215ENST00000533931 MPV17P39210 176 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 KRTAP10-9P60411 292 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 ALKBH1Q13686 389 aaKnown RBP13.34□□□□□ -0.27
CTTN-215ENST00000533931 TBCEQ15813 527 aaPredicted RBP13.34□□□□□ -0.27
CTTN-215ENST00000533931 WDR38Q5JTN6 314 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 FAM209AQ5JX71 171 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 TMEM244Q5VVB8 128 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 PRSS35Q8N3Z0 413 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 CSNK2A3Q8NEV1 391 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 SPRYD4Q8WW59 207 aaPredicted RBP13.34□□□□□ -0.27
CTTN-215ENST00000533931 MBD6Q96DN6 1003 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 DIRC2Q96SL1 478 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 CCL19Q99731 98 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 SLC22A4Q9H015 551 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 ISYNA1Q9NPH2 558 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 BRD7Q9NPI1 651 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 ABCA12Q86UK0 2595 aa13.34□□□□□ -0.27
CTTN-215ENST00000533931 PLSCR5A0PG75 271 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 TMEM212A6NML5 194 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 OR4C45A6NMZ5 311 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 CD300LBA8K4G0 201 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 CLPTM1O96005 669 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 MT-ND2P03891 347 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 CD1AP06126 327 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 CD53P19397 219 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 MMP15P51511 669 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 CHN2P52757 468 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 FAM3AP98173 230 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 HLXQ14774 488 aaPredicted RBP13.33□□□□□ -0.28
CTTN-215ENST00000533931 NKPD1Q17RQ9 610 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 PCGF3Q3KNV8 242 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 OR2G6Q5TZ20 316 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 DOK3Q7L591 496 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 LRP11Q86VZ4 500 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 KLBQ86Z14 1044 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 SVOPQ8N4V2 548 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 OR8G5Q8NG78 346 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 OR2AE1Q8NHA4 323 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 C10orf35Q96D05 121 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 SYT3Q9BQG1 590 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 ABCB9Q9NP78 766 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 ZNF701Q9NV72 531 aaPredicted RBP13.33□□□□□ -0.28
CTTN-215ENST00000533931 BEX4Q9NWD9 120 aaPredicted RBP13.33□□□□□ -0.28
CTTN-215ENST00000533931 NKIRAS2Q9NYR9 191 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 MRPL15Q9P015 296 aaKnown RBP13.33□□□□□ -0.28
CTTN-215ENST00000533931 FRRS1LQ9P0K9 344 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 ZDHHC8Q9ULC8 765 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 LAMP3Q9UQV4 416 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 SLC22A13Q9Y226 551 aa13.33□□□□□ -0.28
CTTN-215ENST00000533931 LSM2Q9Y333 95 aaKnown RBP13.33□□□□□ -0.28
CTTN-215ENST00000533931 LRBAP50851 2863 aa13.32□□□□□ -0.28
CTTN-215ENST00000533931 C5orf63A6NC05 138 aa13.32□□□□□ -0.28
CTTN-215ENST00000533931 GGT3PA6NGU5 568 aa13.32□□□□□ -0.28
CTTN-215ENST00000533931 OGG1O15527 345 aa13.32□□□□□ -0.28
CTTN-215ENST00000533931 TIMM8AO60220 97 aaPredicted RBP13.32□□□□□ -0.28
CTTN-215ENST00000533931 DHRS3O75911 302 aa13.32□□□□□ -0.28
CTTN-215ENST00000533931 ERCC1P07992 297 aaPredicted RBP13.32□□□□□ -0.28
CTTN-215ENST00000533931 ACHEP22303 614 aa13.32□□□□□ -0.28
CTTN-215ENST00000533931 ANOS1P23352 680 aa13.32□□□□□ -0.28
CTTN-215ENST00000533931 DNASE1P24855 282 aa13.32□□□□□ -0.28
CTTN-215ENST00000533931 PSMB10P40306 273 aa13.32□□□□□ -0.28
CTTN-215ENST00000533931 KIR3DL2P43630 455 aa13.32□□□□□ -0.28
CTTN-215ENST00000533931 MAP2K3P46734 347 aa13.32□□□□□ -0.28
CTTN-215ENST00000533931 GSK3AP49840 483 aa13.32□□□□□ -0.28
CTTN-215ENST00000533931 NANOS3P60323 173 aaKnown RBP13.32□□□□□ -0.28
CTTN-215ENST00000533931 CDK5R1Q15078 307 aa13.32□□□□□ -0.28
CTTN-215ENST00000533931 SPHARQ15513 63 aa13.32□□□□□ -0.28
CTTN-215ENST00000533931 ZNF773Q6PK81 442 aa13.32□□□□□ -0.28
CTTN-215ENST00000533931 OR51E1Q8TCB6 317 aa13.32□□□□□ -0.28
CTTN-215ENST00000533931 GATAD2BQ8WXI9 593 aa13.32□□□□□ -0.28
CTTN-215ENST00000533931 SGCDQ92629 289 aa13.32□□□□□ -0.28
CTTN-215ENST00000533931 SMIM19Q96E16 107 aa13.32□□□□□ -0.28
CTTN-215ENST00000533931 NR1H4Q96RI1 486 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms