RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 FBXW12Q6X9E4 464 aa14.95□□□□□ -0.02
NXF1-216ENST00000533499 ELMOD2Q8IZ81 293 aa14.95□□□□□ -0.02
NXF1-216ENST00000533499 PRSS35Q8N3Z0 413 aa14.95□□□□□ -0.02
NXF1-216ENST00000533499 ZNF676Q8N7Q3 588 aa14.95□□□□□ -0.02
NXF1-216ENST00000533499 ZFP41Q8N8Y5 198 aa14.95□□□□□ -0.02
NXF1-216ENST00000533499 OR2G2Q8NGZ5 317 aa14.95□□□□□ -0.02
NXF1-216ENST00000533499 OR52N1Q8NH53 320 aa14.95□□□□□ -0.02
NXF1-216ENST00000533499 HAVCR1Q96D42 359 aa14.95□□□□□ -0.02
NXF1-216ENST00000533499 MND1Q9BWT6 205 aa14.95□□□□□ -0.02
NXF1-216ENST00000533499 CACNG6Q9BXT2 260 aa14.95□□□□□ -0.02
NXF1-216ENST00000533499 YTHDF1Q9BYJ9 559 aaKnown RBP14.95□□□□□ -0.02
NXF1-216ENST00000533499 BABAM2Q9NXR7 383 aa14.95□□□□□ -0.02
NXF1-216ENST00000533499 RAI1Q7Z5J4 1906 aaPredicted RBP14.95□□□□□ -0.02
NXF1-216ENST00000533499 LRBAP50851 2863 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 TRBV2A0A0J9YWF9 115 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 A0A1B0GVI7 797 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 TMEM129A0AVI4 362 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 H3BSA7 217 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 IGHV3-13P01766 116 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 CFL1P23528 166 aaKnown RBP14.94□□□□□ -0.02
NXF1-216ENST00000533499 KIR3DL2P43630 455 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 WNT4P56705 351 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 NANOS3P60323 173 aaKnown RBP14.94□□□□□ -0.02
NXF1-216ENST00000533499 GABARAPL2P60520 117 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 MRPL28Q13084 256 aaKnown RBP14.94□□□□□ -0.02
NXF1-216ENST00000533499 ALKBH1Q13686 389 aaKnown RBP14.94□□□□□ -0.02
NXF1-216ENST00000533499 MST1LQ2TV78 715 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 PRSS48Q7RTY5 328 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 RDH10Q8IZV5 341 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 ZCCHC24Q8N2G6 241 aaKnown RBP14.94□□□□□ -0.02
NXF1-216ENST00000533499 NANOGP1Q8N7R0 232 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 OR56B2PQ8NGI1 322 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 GTF3AQ92664 365 aaKnown RBP14.94□□□□□ -0.02
NXF1-216ENST00000533499 SOX7Q9BT81 388 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 CDCA4Q9BXL8 241 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 TPK1Q9H3S4 243 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 RGCCQ9H4X1 137 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 CXorf56Q9H5V9 222 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 MSL2Q9HCI7 577 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 TRIM36Q9NQ86 728 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 ST6GALNAC2Q9UJ37 374 aa14.94□□□□□ -0.02
NXF1-216ENST00000533499 POLQO75417 2590 aa14.93□□□□□ -0.02
NXF1-216ENST00000533499 CD300LBA8K4G0 201 aa14.93□□□□□ -0.02
NXF1-216ENST00000533499 TPD52L2O43399 206 aaKnown RBP14.93□□□□□ -0.02
NXF1-216ENST00000533499 SPRY3O43610 288 aa14.93□□□□□ -0.02
NXF1-216ENST00000533499 HSMCR30P0CW71 290 aa14.93□□□□□ -0.02
NXF1-216ENST00000533499 GSK3AP49840 483 aa14.93□□□□□ -0.02
NXF1-216ENST00000533499 CHN2P52757 468 aa14.93□□□□□ -0.02
NXF1-216ENST00000533499 FAM3AP98173 230 aa14.93□□□□□ -0.02
NXF1-216ENST00000533499 SLC3A1Q07837 685 aa14.93□□□□□ -0.02
NXF1-216ENST00000533499 SWI5Q1ZZU3 235 aa14.93□□□□□ -0.02
NXF1-216ENST00000533499 TMEM255AQ5JRV8 349 aa14.93□□□□□ -0.02
NXF1-216ENST00000533499 DTX2Q86UW9 622 aa14.93□□□□□ -0.02
NXF1-216ENST00000533499 PIGTQ969N2 578 aa14.93□□□□□ -0.02
NXF1-216ENST00000533499 LYZL4Q96KX0 146 aa14.93□□□□□ -0.02
NXF1-216ENST00000533499 REPIN1Q9BWE0 567 aaKnown RBP14.93□□□□□ -0.02
NXF1-216ENST00000533499 OPA3Q9H6K4 179 aa14.93□□□□□ -0.02
NXF1-216ENST00000533499 FRRS1LQ9P0K9 344 aa14.93□□□□□ -0.02
NXF1-216ENST00000533499 USF3Q68DE3 2245 aa14.93□□□□□ -0.02
NXF1-216ENST00000533499 IGLV3-9A0A075B6K5 115 aa14.92□□□□□ -0.02
NXF1-216ENST00000533499 A0A0U1RQV5 110 aa14.92□□□□□ -0.02
NXF1-216ENST00000533499 LOC107986453A0A1B0GWG9 222 aa14.92□□□□□ -0.02
NXF1-216ENST00000533499 SYT7O43581 403 aa14.92□□□□□ -0.02
NXF1-216ENST00000533499 LALBAP00709 142 aa14.92□□□□□ -0.02
NXF1-216ENST00000533499 KITLGP21583 273 aa14.92□□□□□ -0.02
NXF1-216ENST00000533499 EVX1P49640 407 aa14.92□□□□□ -0.02
NXF1-216ENST00000533499 ZNF81P51508 661 aa14.92□□□□□ -0.02
NXF1-216ENST00000533499 TSTQ16762 297 aaKnown RBP14.92□□□□□ -0.02
NXF1-216ENST00000533499 XAF1Q6GPH4 301 aa14.92□□□□□ -0.02
NXF1-216ENST00000533499 RPL22L1Q6P5R6 122 aaKnown RBP14.92□□□□□ -0.02
NXF1-216ENST00000533499 CDH24Q86UP0 819 aa14.92□□□□□ -0.02
NXF1-216ENST00000533499 SPSB4Q96A44 273 aa14.92□□□□□ -0.02
NXF1-216ENST00000533499 OR5M11Q96RB7 305 aa14.92□□□□□ -0.02
NXF1-216ENST00000533499 COMMD4Q9H0A8 199 aa14.92□□□□□ -0.02
NXF1-216ENST00000533499 ARFGEF3Q5TH69 2177 aa14.91□□□□□ -0.02
NXF1-216ENST00000533499 hCG_38984A0A1B0GV85 526 aa14.91□□□□□ -0.02
NXF1-216ENST00000533499 ANKRD30BLA7E2S9 258 aa14.91□□□□□ -0.02
NXF1-216ENST00000533499 LILRA1O75019 489 aa14.91□□□□□ -0.02
NXF1-216ENST00000533499 MTRF1O75570 445 aaKnown RBP14.91□□□□□ -0.02
NXF1-216ENST00000533499 ERCC1P07992 297 aaPredicted RBP14.91□□□□□ -0.02
NXF1-216ENST00000533499 UBCP0CG48 685 aaKnown RBP14.91□□□□□ -0.02
NXF1-216ENST00000533499 CD53P19397 219 aa14.91□□□□□ -0.02
NXF1-216ENST00000533499 MAP2K3P46734 347 aa14.91□□□□□ -0.02
NXF1-216ENST00000533499 IRF3Q14653 427 aa14.91□□□□□ -0.02
NXF1-216ENST00000533499 SPHARQ15513 63 aa14.91□□□□□ -0.02
NXF1-216ENST00000533499 ZMAT1Q5H9K5 638 aa14.91□□□□□ -0.02
NXF1-216ENST00000533499 RNLSQ5VYX0 342 aa14.91□□□□□ -0.02
NXF1-216ENST00000533499 C11orf71Q6IPW1 123 aa14.91□□□□□ -0.02
NXF1-216ENST00000533499 FDX2Q6P4F2 183 aa14.91□□□□□ -0.02
NXF1-216ENST00000533499 DOK3Q7L591 496 aa14.91□□□□□ -0.02
NXF1-216ENST00000533499 SVOPQ8N4V2 548 aa14.91□□□□□ -0.02
NXF1-216ENST00000533499 OR8G5Q8NG78 346 aa14.91□□□□□ -0.02
NXF1-216ENST00000533499 OR2Z1Q8NG97 314 aa14.91□□□□□ -0.02
NXF1-216ENST00000533499 OR5AK2Q8NH90 309 aa14.91□□□□□ -0.02
NXF1-216ENST00000533499 HAVCR2Q8TDQ0 301 aa14.91□□□□□ -0.02
NXF1-216ENST00000533499 RNF166Q96A37 237 aaPredicted RBP14.91□□□□□ -0.02
NXF1-216ENST00000533499 PERPQ96FX8 193 aa14.91□□□□□ -0.02
NXF1-216ENST00000533499 PDCD1LG2Q9BQ51 273 aa14.91□□□□□ -0.02
NXF1-216ENST00000533499 MS4A5Q9H3V2 200 aa14.91□□□□□ -0.02
NXF1-216ENST00000533499 PLEKHA1Q9HB21 404 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms