RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 C19orf18Q8NEA5 215 aa12.64□□□□□ -0.39
DEPDC7-204ENST00000532078 OR2T4Q8NH00 348 aa12.64□□□□□ -0.39
DEPDC7-204ENST00000532078 TMIGD2Q96BF3 282 aa12.64□□□□□ -0.39
DEPDC7-204ENST00000532078 SLITRK2Q9H156 845 aa12.64□□□□□ -0.39
DEPDC7-204ENST00000532078 PRDM13Q9H4Q3 707 aa12.64□□□□□ -0.39
DEPDC7-204ENST00000532078 OPA3Q9H6K4 179 aa12.64□□□□□ -0.39
DEPDC7-204ENST00000532078 EGLN3Q9H6Z9 239 aa12.64□□□□□ -0.39
DEPDC7-204ENST00000532078 IL1RAPQ9NPH3 570 aa12.64□□□□□ -0.39
DEPDC7-204ENST00000532078 ERVK-18Q9QC07 812 aa12.64□□□□□ -0.39
DEPDC7-204ENST00000532078 SOX21Q9Y651 276 aaPredicted RBP12.64□□□□□ -0.39
DEPDC7-204ENST00000532078 SRRM5B3KS81 715 aa12.63□□□□□ -0.39
DEPDC7-204ENST00000532078 LIPFP07098 398 aa12.63□□□□□ -0.39
DEPDC7-204ENST00000532078 MDKP21741 143 aaPredicted RBP12.63□□□□□ -0.39
DEPDC7-204ENST00000532078 OTX1P32242 354 aaPredicted RBP12.63□□□□□ -0.39
DEPDC7-204ENST00000532078 PYCR1P32322 319 aa12.63□□□□□ -0.39
DEPDC7-204ENST00000532078 ZNF92Q03936 586 aa12.63□□□□□ -0.39
DEPDC7-204ENST00000532078 OR8B8Q15620 311 aa12.63□□□□□ -0.39
DEPDC7-204ENST00000532078 SNAI3Q3KNW1 292 aa12.63□□□□□ -0.39
DEPDC7-204ENST00000532078 PGAM4Q8N0Y7 254 aa12.63□□□□□ -0.39
DEPDC7-204ENST00000532078 LINC00471Q8N535 108 aa12.63□□□□□ -0.39
DEPDC7-204ENST00000532078 SPERTQ8NA61 448 aa12.63□□□□□ -0.39
DEPDC7-204ENST00000532078 CYB561A3Q8NBI2 242 aa12.63□□□□□ -0.39
DEPDC7-204ENST00000532078 OR2AE1Q8NHA4 323 aa12.63□□□□□ -0.39
DEPDC7-204ENST00000532078 PCGF1Q9BSM1 259 aa12.63□□□□□ -0.39
DEPDC7-204ENST00000532078 COPS4Q9BT78 406 aa12.63□□□□□ -0.39
DEPDC7-204ENST00000532078 FAM107BQ9H098 131 aa12.63□□□□□ -0.39
DEPDC7-204ENST00000532078 NOX4Q9NPH5 578 aa12.63□□□□□ -0.39
DEPDC7-204ENST00000532078 MRPL15Q9P015 296 aaKnown RBP12.63□□□□□ -0.39
DEPDC7-204ENST00000532078 CTSZQ9UBR2 303 aa12.63□□□□□ -0.39
DEPDC7-204ENST00000532078 MMP24Q9Y5R2 645 aa12.63□□□□□ -0.39
DEPDC7-204ENST00000532078 COMMD3-BMI1R4GMX3 469 aa12.63□□□□□ -0.39
DEPDC7-204ENST00000532078 TRAV38-1A0A0B4J264 116 aa12.62□□□□□ -0.39
DEPDC7-204ENST00000532078 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.62□□□□□ -0.39
DEPDC7-204ENST00000532078 A0A1B0GUS0 222 aa12.62□□□□□ -0.39
DEPDC7-204ENST00000532078 TVP23AA6NH52 213 aa12.62□□□□□ -0.39
DEPDC7-204ENST00000532078 ZNF879B4DU55 563 aa12.62□□□□□ -0.39
DEPDC7-204ENST00000532078 P2RY10O00398 339 aa12.62□□□□□ -0.39
DEPDC7-204ENST00000532078 BHLHE40O14503 412 aa12.62□□□□□ -0.39
DEPDC7-204ENST00000532078 ADAM20O43506 726 aa12.62□□□□□ -0.39
DEPDC7-204ENST00000532078 NDUFA2O43678 99 aa12.62□□□□□ -0.39
DEPDC7-204ENST00000532078 KRT36O76013 467 aa12.62□□□□□ -0.39
DEPDC7-204ENST00000532078 CFHR2P36980 270 aa12.62□□□□□ -0.39
DEPDC7-204ENST00000532078 RPS27P42677 84 aaKnown RBP12.62□□□□□ -0.39
DEPDC7-204ENST00000532078 MZT1Q08AG7 82 aa12.62□□□□□ -0.39
DEPDC7-204ENST00000532078 GLYATL3Q5SZD4 288 aa12.62□□□□□ -0.39
DEPDC7-204ENST00000532078 DCXRQ7Z4W1 244 aa12.62□□□□□ -0.39
DEPDC7-204ENST00000532078 BOLLQ8N9W6 283 aaKnown RBP12.62□□□□□ -0.39
DEPDC7-204ENST00000532078 CD300AQ9UGN4 299 aa12.62□□□□□ -0.39
DEPDC7-204ENST00000532078 OOEPA6NGQ2 149 aa12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 TOX4O94842 621 aa12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 CRYBA1P05813 215 aa12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 SFTPBP07988 381 aa12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 MSX2P35548 267 aaPredicted RBP12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 TAF13Q15543 124 aa12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 SPATS1Q496A3 300 aa12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 ZNF362Q5T0B9 420 aaPredicted RBP12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 SFRP4Q6FHJ7 346 aaPredicted RBP12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 TMEM86BQ8N661 226 aa12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 PNLDC1Q8NA58 520 aaKnown RBP12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 OR9Q2Q8NGE9 314 aa12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 OR56B2PQ8NGI1 322 aa12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 OR9Q1Q8NGQ5 310 aa12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 TAF15Q92804 592 aaKnown RBP eCLIP12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 CDRT15Q96T59 188 aa12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 BTBD10Q9BSF8 475 aa12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 MARCH7Q9H992 704 aa12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 TBC1D23Q9NUY8 699 aa12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 C14orf119Q9NWQ9 140 aa12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 C1orf123Q9NWV4 160 aa12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 NDE1Q9NXR1 346 aa12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 LYVE1Q9Y5Y7 322 aa12.61□□□□□ -0.39
DEPDC7-204ENST00000532078 hCG_1807616A0A1W2PRN6 198 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 A6NLC8 198 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 ZNF878C9JN71 531 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 TNFRSF11BO00300 401 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 KCNAB3O43448 404 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 XRCC2O43543 280 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 SNX3O60493 162 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 KNG1P01042 644 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 SPARCP09486 303 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 MMP9P14780 707 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 OMGP23515 440 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 FMO3P31513 532 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 ENTPD1P49961 510 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 PRKXP51817 358 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 HMGA2P52926 109 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 RAG2P55895 527 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 HOXA4Q00056 320 aaPredicted RBP12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 METTL11BQ5VVY1 283 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 RUSC1-AS1Q66K80 236 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 C16orf89Q6UX73 402 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 Q6YL49 198 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 RASSF6Q6ZTQ3 369 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 SLC37A3Q8NCC5 494 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 OR51L1Q8NGJ5 315 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 OR4F5Q8NH21 305 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 GATAD2BQ8WXI9 593 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 SLAMF6Q96DU3 332 aa12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 FAM71F1Q96KD3 344 aaPredicted RBP12.6□□□□□ -0.39
DEPDC7-204ENST00000532078 WDFY2Q96P53 400 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms