RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 NUFIP1Q9UHK0 495 aaKnown RBP12.34□□□□□ -0.43
CPSF1-206ENST00000531480 ZNF469Q96JG9 3925 aaPredicted RBP12.33□□□□□ -0.44
CPSF1-206ENST00000531480 A0A0U1RQV5 110 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 TMEM269A0A1B0GVZ9 245 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 A0A1W2PPW3 197 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 METTL15A6NJ78 407 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 PSMD9O00233 223 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 MAGEB4O15481 346 aaPredicted RBP12.33□□□□□ -0.44
CPSF1-206ENST00000531480 SELEP16581 610 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 DCKP27707 260 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 RPL5P46777 297 aaKnown RBP12.33□□□□□ -0.44
CPSF1-206ENST00000531480 ATP5J2P56134 94 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 GALEQ14376 348 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 ZNF829Q3KNS6 432 aaPredicted RBP12.33□□□□□ -0.44
CPSF1-206ENST00000531480 LIPNQ5VXI9 398 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 SHEQ5VZ18 495 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 FDX2Q6P4F2 183 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 Q6ZR03 302 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 PLEKHG7Q6ZR37 379 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 Q6ZSR3 168 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 PGAP1Q75T13 922 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 PRSS48Q7RTY5 328 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 ZCCHC24Q8N2G6 241 aaKnown RBP12.33□□□□□ -0.44
CPSF1-206ENST00000531480 OR8G5Q8NG78 346 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 OR8B12Q8NGG6 310 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 NEU4Q8WWR8 484 aaPredicted RBP12.33□□□□□ -0.44
CPSF1-206ENST00000531480 PERPQ96FX8 193 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 TMEM80Q96HE8 168 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 TBX5Q99593 518 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 CCDC90BQ9GZT6 254 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 RAB1BQ9H0U4 201 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 OR10A2Q9H208 303 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 DUSP21Q9H596 190 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 MOB1AQ9H8S9 216 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 ERVK13-1Q9NX77 482 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 PSORS1C1Q9UIG5 152 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 ERGIC3Q9Y282 383 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 PCDHGB5Q9Y5G0 923 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 R4GMQ9 66 aa12.33□□□□□ -0.44
CPSF1-206ENST00000531480 TANC2Q9HCD6 1990 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 hCG_38984A0A1B0GV85 526 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 DAPL1A0PJW8 107 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 ZSCAN5BA6NJL1 495 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 MT-ND5P03915 603 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 KRT8P05787 483 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 ANXA2P07355 339 aaKnown RBP12.32□□□□□ -0.44
CPSF1-206ENST00000531480 CD55P08174 381 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 LIMS3P0CW19 117 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 LIMS4P0CW20 117 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 NAT2P11245 290 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 CFL1P23528 166 aaKnown RBP12.32□□□□□ -0.44
CPSF1-206ENST00000531480 MRPS11P82912 194 aaKnown RBP12.32□□□□□ -0.44
CPSF1-206ENST00000531480 FAM3AP98173 230 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 MFGE8Q08431 387 aaPredicted RBP12.32□□□□□ -0.44
CPSF1-206ENST00000531480 TNK1Q13470 666 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 OR8B8Q15620 311 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 NKPD1Q17RQ9 610 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 PCGF3Q3KNV8 242 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 ZMAT1Q5H9K5 638 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 FAM209AQ5JX71 171 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 RNLSQ5VYX0 342 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 FAM57BQ71RH2 274 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 SYS1Q8N2H4 156 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 OR2AE1Q8NHA4 323 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 RORBQ92753 470 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 GGHQ92820 318 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 DIRC2Q96SL1 478 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 SLC30A2Q9BRI3 323 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 TTTY10Q9BZA0 68 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 DYNLRB1Q9NP97 96 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 IKZF2Q9UKS7 526 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 ZDHHC8Q9ULC8 765 aa12.32□□□□□ -0.44
CPSF1-206ENST00000531480 DIMT1Q9UNQ2 313 aaKnown RBP12.32□□□□□ -0.44
CPSF1-206ENST00000531480 TRIM64A6NGJ6 449 aa12.31□□□□□ -0.44
CPSF1-206ENST00000531480 CD300LBA8K4G0 201 aa12.31□□□□□ -0.44
CPSF1-206ENST00000531480 TIMM8AO60220 97 aaPredicted RBP12.31□□□□□ -0.44
CPSF1-206ENST00000531480 IGHV1-46P01743 117 aa12.31□□□□□ -0.44
CPSF1-206ENST00000531480 TTRP02766 147 aa12.31□□□□□ -0.44
CPSF1-206ENST00000531480 DDOSTP39656 456 aa12.31□□□□□ -0.44
CPSF1-206ENST00000531480 ZNF81P51508 661 aa12.31□□□□□ -0.44
CPSF1-206ENST00000531480 ACTA2P62736 377 aa12.31□□□□□ -0.44
CPSF1-206ENST00000531480 ACTG2P63267 376 aa12.31□□□□□ -0.44
CPSF1-206ENST00000531480 SLC35A2P78381 396 aa12.31□□□□□ -0.44
CPSF1-206ENST00000531480 BLMHQ13867 455 aa12.31□□□□□ -0.44
CPSF1-206ENST00000531480 OR2T2Q6IF00 324 aa12.31□□□□□ -0.44
CPSF1-206ENST00000531480 MRPL21Q7Z2W9 205 aaKnown RBP12.31□□□□□ -0.44
CPSF1-206ENST00000531480 ELMOD2Q8IZ81 293 aa12.31□□□□□ -0.44
CPSF1-206ENST00000531480 PLPP7Q8NBV4 271 aa12.31□□□□□ -0.44
CPSF1-206ENST00000531480 HAVCR2Q8TDQ0 301 aa12.31□□□□□ -0.44
CPSF1-206ENST00000531480 SNX33Q8WV41 574 aa12.31□□□□□ -0.44
CPSF1-206ENST00000531480 GTF3AQ92664 365 aaKnown RBP12.31□□□□□ -0.44
CPSF1-206ENST00000531480 REEP6Q96HR9 211 aa12.31□□□□□ -0.44
CPSF1-206ENST00000531480 PGAM5Q96HS1 289 aa12.31□□□□□ -0.44
CPSF1-206ENST00000531480 LYZL4Q96KX0 146 aa12.31□□□□□ -0.44
CPSF1-206ENST00000531480 SIGLEC11Q96RL6 698 aa12.31□□□□□ -0.44
CPSF1-206ENST00000531480 VRK1Q99986 396 aaPredicted RBP12.31□□□□□ -0.44
CPSF1-206ENST00000531480 RHNO1Q9BSD3 238 aa12.31□□□□□ -0.44
CPSF1-206ENST00000531480 PBOV1Q9GZY1 135 aa12.31□□□□□ -0.44
CPSF1-206ENST00000531480 MYOZ1Q9NP98 299 aaPredicted RBP12.31□□□□□ -0.44
CPSF1-206ENST00000531480 EXOSC1Q9Y3B2 195 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms