RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 ADAT1Q9BUB4 502 aaKnown RBP18.6■□□□□ 0.57
TRAPPC4-210ENST00000531290 BAIAP2Q9UQB8 552 aa18.6■□□□□ 0.57
TRAPPC4-210ENST00000531290 N6AMT1Q9Y5N5 214 aa18.6■□□□□ 0.57
TRAPPC4-210ENST00000531290 U3KQV3 271 aa18.6■□□□□ 0.57
TRAPPC4-210ENST00000531290 OTX1P32242 354 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC4-210ENST00000531290 ENTPD1P49961 510 aa18.59■□□□□ 0.57
TRAPPC4-210ENST00000531290 PRKXP51817 358 aa18.59■□□□□ 0.57
TRAPPC4-210ENST00000531290 PPP1R8Q12972 351 aaKnown RBP18.59■□□□□ 0.57
TRAPPC4-210ENST00000531290 CRMP1Q14194 572 aa18.59■□□□□ 0.57
TRAPPC4-210ENST00000531290 GK3PQ14409 553 aa18.59■□□□□ 0.57
TRAPPC4-210ENST00000531290 WDR25Q64LD2 544 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC4-210ENST00000531290 LYPD4Q6UWN0 246 aa18.59■□□□□ 0.57
TRAPPC4-210ENST00000531290 LYPD2Q6UXB3 125 aa18.59■□□□□ 0.57
TRAPPC4-210ENST00000531290 BOLLQ8N9W6 283 aaKnown RBP18.59■□□□□ 0.57
TRAPPC4-210ENST00000531290 SPERTQ8NA61 448 aa18.59■□□□□ 0.57
TRAPPC4-210ENST00000531290 PLPP7Q8NBV4 271 aa18.59■□□□□ 0.57
TRAPPC4-210ENST00000531290 C19orf18Q8NEA5 215 aa18.59■□□□□ 0.57
TRAPPC4-210ENST00000531290 OR2T33Q8NG76 320 aa18.59■□□□□ 0.57
TRAPPC4-210ENST00000531290 KCNJ15Q99712 375 aa18.59■□□□□ 0.57
TRAPPC4-210ENST00000531290 MRPL15Q9P015 296 aaKnown RBP18.59■□□□□ 0.57
TRAPPC4-210ENST00000531290 COMMD3-BMI1R4GMX3 469 aa18.59■□□□□ 0.57
TRAPPC4-210ENST00000531290 TANC2Q9HCD6 1990 aa18.59■□□□□ 0.57
TRAPPC4-210ENST00000531290 ARHGAP32A7KAX9 2087 aa18.58■□□□□ 0.57
TRAPPC4-210ENST00000531290 ZNF593O00488 134 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC4-210ENST00000531290 PHYHO14832 338 aa18.58■□□□□ 0.56
TRAPPC4-210ENST00000531290 GSC2O15499 205 aa18.58■□□□□ 0.56
TRAPPC4-210ENST00000531290 IFNGP01579 166 aa18.58■□□□□ 0.56
TRAPPC4-210ENST00000531290 EGR1P18146 543 aa18.58■□□□□ 0.56
TRAPPC4-210ENST00000531290 SLC25A1P53007 311 aa18.58■□□□□ 0.56
TRAPPC4-210ENST00000531290 MICAQ29983 383 aa18.58■□□□□ 0.56
TRAPPC4-210ENST00000531290 GLYATL3Q5SZD4 288 aa18.58■□□□□ 0.56
TRAPPC4-210ENST00000531290 ZNF511Q8NB15 262 aa18.58■□□□□ 0.56
TRAPPC4-210ENST00000531290 CANT1Q8WVQ1 401 aa18.58■□□□□ 0.56
TRAPPC4-210ENST00000531290 SLAMF6Q96DU3 332 aa18.58■□□□□ 0.56
TRAPPC4-210ENST00000531290 MMADHCQ9H3L0 296 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC4-210ENST00000531290 POMPQ9Y244 141 aa18.58■□□□□ 0.56
TRAPPC4-210ENST00000531290 PCDHGB1Q9Y5G3 927 aa18.58■□□□□ 0.56
TRAPPC4-210ENST00000531290 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC4-210ENST00000531290 GYPBP06028 91 aa18.57■□□□□ 0.56
TRAPPC4-210ENST00000531290 BLVRAP53004 296 aa18.57■□□□□ 0.56
TRAPPC4-210ENST00000531290 MZT1Q08AG7 82 aa18.57■□□□□ 0.56
TRAPPC4-210ENST00000531290 TEX30Q5JUR7 227 aa18.57■□□□□ 0.56
TRAPPC4-210ENST00000531290 CD276Q5ZPR3 534 aa18.57■□□□□ 0.56
TRAPPC4-210ENST00000531290 SFRP4Q6FHJ7 346 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC4-210ENST00000531290 C9orf139Q6ZV77 190 aa18.57■□□□□ 0.56
TRAPPC4-210ENST00000531290 ADGRG5Q8IZF4 528 aa18.57■□□□□ 0.56
TRAPPC4-210ENST00000531290 OR6K6Q8NGW6 343 aa18.57■□□□□ 0.56
TRAPPC4-210ENST00000531290 DACT3Q96B18 629 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC4-210ENST00000531290 ZNF747Q9BV97 191 aa18.57■□□□□ 0.56
TRAPPC4-210ENST00000531290 OPA3Q9H6K4 179 aa18.57■□□□□ 0.56
TRAPPC4-210ENST00000531290 TRIM36Q9NQ86 728 aa18.57■□□□□ 0.56
TRAPPC4-210ENST00000531290 ERVK-18Q9QC07 812 aa18.57■□□□□ 0.56
TRAPPC4-210ENST00000531290 TRAV40A0A0B4J280 105 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 RIIAD1A6NNX1 92 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 CLDN34H7C241 214 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 LGALS8O00214 317 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 SOX14O95416 240 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 PLATP00750 562 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 GRPP07492 148 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 RNASE1P07998 156 aaKnown RBP18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 SLC2A1P11166 492 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 SPI1P17947 270 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 PSMB10P40306 273 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 SLC15A1P46059 708 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 NPY4RP50391 375 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 OR8B8Q15620 311 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 PCK2Q16822 640 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 SHISA2Q6UWI4 295 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 ZNF841Q6ZN19 808 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 OR4Q3Q8NH05 313 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 C1orf147Q96MC9 270 aaPredicted RBP18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 TECTBQ96PL2 329 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 DGCR6LQ9BY27 220 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 CADM1Q9BY67 442 aaKnown RBP18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 NMNAT2Q9BZQ4 307 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 ARMC1Q9NVT9 282 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 C14orf119Q9NWQ9 140 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 C1orf123Q9NWV4 160 aa18.56■□□□□ 0.56
TRAPPC4-210ENST00000531290 TRAV38-1A0A0B4J264 116 aa18.55■□□□□ 0.56
TRAPPC4-210ENST00000531290 C5orf63A6NC05 138 aa18.55■□□□□ 0.56
TRAPPC4-210ENST00000531290 A6NLC8 198 aa18.55■□□□□ 0.56
TRAPPC4-210ENST00000531290 ZNF878C9JN71 531 aa18.55■□□□□ 0.56
TRAPPC4-210ENST00000531290 C3orf80F5H4A9 247 aa18.55■□□□□ 0.56
TRAPPC4-210ENST00000531290 XRCC2O43543 280 aa18.55■□□□□ 0.56
TRAPPC4-210ENST00000531290 NDUFA2O43678 99 aa18.55■□□□□ 0.56
TRAPPC4-210ENST00000531290 ENSAO43768 121 aaKnown RBP18.55■□□□□ 0.56
TRAPPC4-210ENST00000531290 E2F6O75461 281 aa18.55■□□□□ 0.56
TRAPPC4-210ENST00000531290 PTBP3O95758 552 aaKnown RBP18.55■□□□□ 0.56
TRAPPC4-210ENST00000531290 PSKH1P11801 424 aa18.55■□□□□ 0.56
TRAPPC4-210ENST00000531290 ZNF3P17036 446 aa18.55■□□□□ 0.56
TRAPPC4-210ENST00000531290 DDOSTP39656 456 aa18.55■□□□□ 0.56
TRAPPC4-210ENST00000531290 FGF12P61328 243 aa18.55■□□□□ 0.56
TRAPPC4-210ENST00000531290 SLC9A3R2Q15599 337 aa18.55■□□□□ 0.56
TRAPPC4-210ENST00000531290 SPATC1Q76KD6 591 aa18.55■□□□□ 0.56
TRAPPC4-210ENST00000531290 OR10G2Q8NGC3 310 aa18.55■□□□□ 0.56
TRAPPC4-210ENST00000531290 OR56B2PQ8NGI1 322 aa18.55■□□□□ 0.56
TRAPPC4-210ENST00000531290 SP140LQ9H930 580 aa18.55■□□□□ 0.56
TRAPPC4-210ENST00000531290 SOX21Q9Y651 276 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC4-210ENST00000531290 ANKRD30BLA7E2S9 258 aa18.54■□□□□ 0.56
TRAPPC4-210ENST00000531290 CLUP10909 449 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms