RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 OAFQ86UD1 273 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 PCP2Q8IVA1 136 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 ZNF547Q8IVP9 402 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 NELFCDQ8IXH7 590 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 KIF2BQ8N4N8 673 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 NECAP1Q8NC96 275 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 OR6K6Q8NGW6 343 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 OR6K2Q8NGY2 324 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 OR51F2Q8NH61 342 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 UBA3Q8TBC4 463 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 SRSF12Q8WXF0 261 aaKnown RBP2.94□□□□□ -1.94
C11orf88-204ENST00000529661 EEF1AKMT3Q96AZ1 226 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 CREB3L1Q96BA8 519 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 SEH1LQ96EE3 360 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 CENPNQ96H22 339 aaPredicted RBP2.94□□□□□ -1.94
C11orf88-204ENST00000529661 ALS2CR12Q96Q35 445 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 TAAR1Q96RJ0 339 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 UQCC2Q9BRT2 126 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 UPF3BQ9BZI7 483 aaKnown RBP2.94□□□□□ -1.94
C11orf88-204ENST00000529661 NAA50Q9GZZ1 169 aaKnown RBP2.94□□□□□ -1.94
C11orf88-204ENST00000529661 NSRP1Q9H0G5 558 aaKnown RBP2.94□□□□□ -1.94
C11orf88-204ENST00000529661 TMEM38AQ9H6F2 299 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 BEX1Q9HBH7 125 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 SLC38A10Q9HBR0 1119 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 ZNF331Q9NQX6 463 aaPredicted RBP2.94□□□□□ -1.94
C11orf88-204ENST00000529661 RMND1Q9NWS8 449 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 TSSC4Q9Y5U2 329 aaPredicted RBP2.94□□□□□ -1.94
C11orf88-204ENST00000529661 URGCP-MRPS24S4R325 110 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 POLR3AO14802 1390 aaPredicted RBP2.94□□□□□ -1.94
C11orf88-204ENST00000529661 ADCY9O60503 1353 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 DENND4AQ7Z401 1863 aa2.94□□□□□ -1.94
C11orf88-204ENST00000529661 MN1Q10571 1320 aaPredicted RBP2.93□□□□□ -1.94
C11orf88-204ENST00000529661 CIB4A0PJX0 185 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 SLC9A3R1O14745 358 aaPredicted RBP2.93□□□□□ -1.94
C11orf88-204ENST00000529661 B4GALT5O43286 388 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 ERI3O43414 337 aaKnown RBP2.93□□□□□ -1.94
C11orf88-204ENST00000529661 ICOSLGO75144 302 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 MPDU1O75352 247 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 CA11O75493 328 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 LDOC1O95751 146 aaPredicted RBP2.93□□□□□ -1.94
C11orf88-204ENST00000529661 OXTP01178 125 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 PGAM1P18669 254 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 RAB3BP20337 219 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 F2RP25116 425 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 LOXP28300 417 aaPredicted RBP2.93□□□□□ -1.94
C11orf88-204ENST00000529661 MAS1LP35410 378 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 CSNK1A1P48729 337 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 ZNF138P52744 262 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 UBE2G2P60604 165 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 VSNL1P62760 191 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 SEMG2Q02383 582 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 ZBTB6Q15916 424 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 ZNF658BQ4V348 819 aaPredicted RBP2.93□□□□□ -1.94
C11orf88-204ENST00000529661 CD300LGQ6UXG3 332 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 NPWQ8N729 165 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 CDRT4Q8N9R6 151 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 OR10G4Q8NGN3 311 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 OR2L8Q8NGY9 312 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 ZFP90Q8TF47 636 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 OR8D1Q8WZ84 308 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 COL21A1Q96P44 957 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 ZNF251Q9BRH9 671 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 TIMM29Q9BSF4 260 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 SRRQ9GZT4 340 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 SLC38A1Q9H2H9 487 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 IFI27L2Q9H2X8 130 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 LRRC19Q9H756 370 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 PSTPIP2Q9H939 334 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 MRM3Q9HC36 420 aaKnown RBP2.93□□□□□ -1.94
C11orf88-204ENST00000529661 MAT2BQ9NZL9 334 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 SCML1Q9UN30 329 aa2.93□□□□□ -1.94
C11orf88-204ENST00000529661 A0A0A6YYD5 115 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 A0A0A6YYH2 397 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 A0A1B0GW55 424 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 A6NJ64 397 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 F8VZ95 297 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 CLDN34H7C241 214 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 COCHO43405 550 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 TDP2O95551 362 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 RHOCP08134 193 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 DUX4L2P0CJ85 424 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 DUX4L3P0CJ86 424 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 DUX4L5P0CJ88 424 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 DUX4L6P0CJ89 424 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 DUX4L7P0CJ90 424 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 ATF6P18850 670 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 TEAD1P28347 426 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 ARR3P36575 388 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 CEACAM6P40199 344 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 CYB561P49447 251 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 PRLHRP49683 370 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 TAS2R60P59551 318 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 SLC35B1P78383 322 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 OR4D1Q15615 310 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 RGS21Q2M5E4 152 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 THEM4Q5T1C6 240 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 HES5Q5TA89 166 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 DNAJC24Q6P3W2 148 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 FAHD1Q6P587 224 aa2.92□□□□□ -1.94
C11orf88-204ENST00000529661 WDR82Q6UXN9 313 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms