RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 ZNF771Q7L3S4 317 aaPredicted RBP11.33□□□□□ -0.6
CAPN1-215ENST00000528396 COMMD2Q86X83 199 aa11.33□□□□□ -0.6
CAPN1-215ENST00000528396 SLC35F2Q8IXU6 374 aa11.33□□□□□ -0.6
CAPN1-215ENST00000528396 FTMTQ8N4E7 242 aa11.33□□□□□ -0.6
CAPN1-215ENST00000528396 OR51G2Q8NGK0 314 aa11.33□□□□□ -0.6
CAPN1-215ENST00000528396 OR11L1Q8NGX0 322 aa11.33□□□□□ -0.6
CAPN1-215ENST00000528396 MEGF10Q96KG7 1140 aa11.33□□□□□ -0.6
CAPN1-215ENST00000528396 MNTQ99583 582 aa11.33□□□□□ -0.6
CAPN1-215ENST00000528396 ADAT1Q9BUB4 502 aaKnown RBP11.33□□□□□ -0.6
CAPN1-215ENST00000528396 REPIN1Q9BWE0 567 aaKnown RBP11.33□□□□□ -0.6
CAPN1-215ENST00000528396 BEX2Q9BXY8 128 aa11.33□□□□□ -0.6
CAPN1-215ENST00000528396 TTTY10Q9BZA0 68 aa11.33□□□□□ -0.6
CAPN1-215ENST00000528396 RGCCQ9H4X1 137 aa11.33□□□□□ -0.6
CAPN1-215ENST00000528396 UBAP1Q9NZ09 502 aa11.33□□□□□ -0.6
CAPN1-215ENST00000528396 MRPL15Q9P015 296 aaKnown RBP11.33□□□□□ -0.6
CAPN1-215ENST00000528396 WARS2Q9UGM6 360 aaKnown RBP11.33□□□□□ -0.6
CAPN1-215ENST00000528396 PCDHB10Q9UN67 800 aa11.33□□□□□ -0.6
CAPN1-215ENST00000528396 KLHDC2Q9Y2U9 406 aa11.33□□□□□ -0.6
CAPN1-215ENST00000528396 LRP12Q9Y561 859 aa11.33□□□□□ -0.6
CAPN1-215ENST00000528396 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.33□□□□□ -0.62e-10■■■□□ 18.1
CAPN1-215ENST00000528396 IGHV3-64DA0A0J9YX35 117 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 B4DSR2 109 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 H0YL77 283 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 GMDSO60547 372 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 ZNF254O75437 659 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 SBK2P0C263 348 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 ANPEPP15144 967 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 PCMT1P22061 227 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 DDOSTP39656 456 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 RIDAP52758 137 aaKnown RBP11.32□□□□□ -0.6
CAPN1-215ENST00000528396 PSMA6P60900 246 aaKnown RBP11.32□□□□□ -0.6
CAPN1-215ENST00000528396 ZNF829Q3KNS6 432 aaPredicted RBP11.32□□□□□ -0.6
CAPN1-215ENST00000528396 CHRFAM7AQ494W8 412 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 SPRNQ5BIV9 151 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 DEGS2Q6QHC5 323 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 ZNF322Q6U7Q0 402 aaPredicted RBP11.32□□□□□ -0.6
CAPN1-215ENST00000528396 SPERTQ8NA61 448 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 OR56B2PQ8NGI1 322 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 OR8S1Q8NH09 359 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 TRUB1Q8WWH5 349 aaKnown RBP11.32□□□□□ -0.6
CAPN1-215ENST00000528396 SHARPINQ9H0F6 387 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 ZNF665Q9H7R5 613 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 LPAR2Q9HBW0 351 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 CLN6Q9NWW5 311 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 CDC42EP3Q9UKI2 254 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 GTF2A1LQ9UNN4 478 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 NPTNQ9Y639 398 aa11.32□□□□□ -0.6
CAPN1-215ENST00000528396 TMEM269A0A1B0GVZ9 245 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 C5orf63A6NC05 138 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 SNTNA6NMZ2 147 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 PSMD9O00233 223 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 WNT9BO14905 357 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 MLNRO43193 412 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 CRLF1O75462 422 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 HTR1FP30939 366 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 MMP16P51512 607 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 ZSCAN26Q16670 478 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 MOGAT3Q86VF5 341 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 GLCCI1Q86VQ1 547 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 KLBQ86Z14 1044 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 ZNF679Q8IYX0 411 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 C1orf87Q8N0U7 546 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 KLHL36Q8N4N3 616 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 SPICQ8N5J4 248 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 CSNK2A3Q8NEV1 391 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 OR51F2Q8NH61 342 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 SGK3Q96BR1 496 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 POM121Q96HA1 1249 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 FN3KRPQ9HA64 309 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 ADGRL4Q9HBW9 690 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 GCM1Q9NP62 436 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 C14orf119Q9NWQ9 140 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 LPAR3Q9UBY5 353 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 ZNF391Q9UJN7 358 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.31□□□□□ -0.67e-22■■■■■ 89.9
CAPN1-215ENST00000528396 GMPPBQ9Y5P6 360 aa11.31□□□□□ -0.6
CAPN1-215ENST00000528396 ACOD1A6NK06 481 aa11.3□□□□□ -0.6
CAPN1-215ENST00000528396 KRT8P05787 483 aa11.3□□□□□ -0.6
CAPN1-215ENST00000528396 HOXB4P17483 251 aaPredicted RBP11.3□□□□□ -0.6
CAPN1-215ENST00000528396 GSK3AP49840 483 aa11.3□□□□□ -0.6
CAPN1-215ENST00000528396 CXCR4P61073 352 aa11.3□□□□□ -0.6
CAPN1-215ENST00000528396 BTG1P62324 171 aa11.3□□□□□ -0.6
CAPN1-215ENST00000528396 EFNB1P98172 346 aa11.3□□□□□ -0.6
CAPN1-215ENST00000528396 FAM3AP98173 230 aa11.3□□□□□ -0.6
CAPN1-215ENST00000528396 TMED1Q13445 227 aa11.3□□□□□ -0.6
CAPN1-215ENST00000528396 MUC20Q8N307 709 aaPredicted RBP11.3□□□□□ -0.6
CAPN1-215ENST00000528396 CELF2-AS1Q8N7Q2 184 aa11.3□□□□□ -0.6
CAPN1-215ENST00000528396 OR10H4Q8NGA5 316 aa11.3□□□□□ -0.6
CAPN1-215ENST00000528396 ZNF420Q8TAQ5 688 aaPredicted RBP11.3□□□□□ -0.6
CAPN1-215ENST00000528396 ERGIC1Q969X5 290 aa11.3□□□□□ -0.6
CAPN1-215ENST00000528396 SPSB4Q96A44 273 aa11.3□□□□□ -0.6
CAPN1-215ENST00000528396 HRASLS5Q96KN8 279 aa11.3□□□□□ -0.6
CAPN1-215ENST00000528396 OR8B4Q96RC9 309 aa11.3□□□□□ -0.6
CAPN1-215ENST00000528396 TBX5Q99593 518 aa11.3□□□□□ -0.6
CAPN1-215ENST00000528396 SOX7Q9BT81 388 aa11.3□□□□□ -0.6
CAPN1-215ENST00000528396 PAPOLGQ9BWT3 736 aaKnown RBP11.3□□□□□ -0.6
CAPN1-215ENST00000528396 UFSP2Q9NUQ7 469 aa11.3□□□□□ -0.6
CAPN1-215ENST00000528396 HAO2Q9NYQ3 351 aa11.3□□□□□ -0.6
CAPN1-215ENST00000528396 ABCA2Q9BZC7 2435 aa11.29□□□□□ -0.6
CAPN1-215ENST00000528396 MALRD1Q5VYJ5 2156 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms