RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 WNK2Q9Y3S1 2297 aa27.75■■■□□ 2.03
SSSCA1-205ENST00000527920 CYB5R3P00387 301 aaPredicted RBP27.74■■■□□ 2.03
SSSCA1-205ENST00000527920 SLC2A5P22732 501 aa27.74■■■□□ 2.03
SSSCA1-205ENST00000527920 CA6P23280 308 aa27.74■■■□□ 2.03
SSSCA1-205ENST00000527920 ZFP36P26651 326 aaKnown RBP27.74■■■□□ 2.03
SSSCA1-205ENST00000527920 RBMXP38159 391 aaKnown RBP27.74■■■□□ 2.03
SSSCA1-205ENST00000527920 CRISP1P54107 249 aa27.74■■■□□ 2.03
SSSCA1-205ENST00000527920 KRTAP24-1Q3LI83 254 aa27.74■■■□□ 2.03
SSSCA1-205ENST00000527920 C1QL2Q7Z5L3 287 aa27.74■■■□□ 2.03
SSSCA1-205ENST00000527920 SPERTQ8NA61 448 aa27.74■■■□□ 2.03
SSSCA1-205ENST00000527920 AMELYQ99218 206 aa27.74■■■□□ 2.03
SSSCA1-205ENST00000527920 ADAT1Q9BUB4 502 aaKnown RBP27.74■■■□□ 2.03
SSSCA1-205ENST00000527920 CEACAM18A8MTB9 384 aa27.73■■■□□ 2.03
SSSCA1-205ENST00000527920 TCF21O43680 179 aa27.73■■■□□ 2.03
SSSCA1-205ENST00000527920 AVPP01185 164 aa27.73■■■□□ 2.03
SSSCA1-205ENST00000527920 PMELP40967 661 aa27.73■■■□□ 2.03
SSSCA1-205ENST00000527920 DAPP51397 102 aa27.73■■■□□ 2.03
SSSCA1-205ENST00000527920 ESRRGP62508 458 aa27.73■■■□□ 2.03
SSSCA1-205ENST00000527920 KLHL12Q53G59 568 aa27.73■■■□□ 2.03
SSSCA1-205ENST00000527920 C1orf146Q5VVC0 180 aa27.73■■■□□ 2.03
SSSCA1-205ENST00000527920 TMEM236Q5W0B7 351 aa27.73■■■□□ 2.03
SSSCA1-205ENST00000527920 OR56B2PQ8NGI1 322 aa27.73■■■□□ 2.03
SSSCA1-205ENST00000527920 OR11L1Q8NGX0 322 aa27.73■■■□□ 2.03
SSSCA1-205ENST00000527920 TMEM165Q9HC07 324 aa27.73■■■□□ 2.03
SSSCA1-205ENST00000527920 LRCH1Q9Y2L9 728 aa27.73■■■□□ 2.03
SSSCA1-205ENST00000527920 ANXA2P07355 339 aaKnown RBP27.72■■■□□ 2.03
SSSCA1-205ENST00000527920 LYNP07948 512 aa27.72■■■□□ 2.03
SSSCA1-205ENST00000527920 IRF2P14316 349 aa27.72■■■□□ 2.03
SSSCA1-205ENST00000527920 CFL1P23528 166 aaKnown RBP27.72■■■□□ 2.03
SSSCA1-205ENST00000527920 AP4S1Q9Y587 144 aa27.72■■■□□ 2.03
SSSCA1-205ENST00000527920 A0A0A6YYJ9 748 aa27.71■■■□□ 2.03
SSSCA1-205ENST00000527920 IGHV3-64DA0A0J9YX35 117 aa27.71■■■□□ 2.03
SSSCA1-205ENST00000527920 SELENOFO60613 162 aa27.71■■■□□ 2.03
SSSCA1-205ENST00000527920 ZNF121P58317 390 aaPredicted RBP27.71■■■□□ 2.03
SSSCA1-205ENST00000527920 SNAPC1Q16533 368 aa27.71■■■□□ 2.03
SSSCA1-205ENST00000527920 ESCO2Q56NI9 601 aa27.71■■■□□ 2.03
SSSCA1-205ENST00000527920 PRRG3Q9BZD7 231 aa27.71■■■□□ 2.03
SSSCA1-205ENST00000527920 RGCCQ9H4X1 137 aa27.71■■■□□ 2.03
SSSCA1-205ENST00000527920 LOC105371242A0A075B767 164 aa27.7■■■□□ 2.02
SSSCA1-205ENST00000527920 WNT2P09544 360 aa27.7■■■□□ 2.02
SSSCA1-205ENST00000527920 H2BFMP0C1H6 154 aa27.7■■■□□ 2.02
SSSCA1-205ENST00000527920 FCGR1AP12314 374 aa27.7■■■□□ 2.02
SSSCA1-205ENST00000527920 FASP25445 335 aa27.7■■■□□ 2.02
SSSCA1-205ENST00000527920 MZT1Q08AG7 82 aa27.7■■■□□ 2.02
SSSCA1-205ENST00000527920 TIGD6Q17RP2 521 aa27.7■■■□□ 2.02
SSSCA1-205ENST00000527920 ZNF404Q494X3 552 aa27.7■■■□□ 2.02
SSSCA1-205ENST00000527920 SLC16A9Q7RTY1 509 aa27.7■■■□□ 2.02
SSSCA1-205ENST00000527920 BBS1Q8NFJ9 593 aa27.7■■■□□ 2.02
SSSCA1-205ENST00000527920 C7orf69Q9H7B7 122 aa27.7■■■□□ 2.02
SSSCA1-205ENST00000527920 NIPAL2Q9H841 368 aa27.7■■■□□ 2.02
SSSCA1-205ENST00000527920 FN3KRPQ9HA64 309 aa27.7■■■□□ 2.02
SSSCA1-205ENST00000527920 TVP23BQ9NYZ1 205 aa27.7■■■□□ 2.02
SSSCA1-205ENST00000527920 MIOXQ9UGB7 285 aa27.7■■■□□ 2.02
SSSCA1-205ENST00000527920 OPN4Q9UHM6 478 aa27.7■■■□□ 2.02
SSSCA1-205ENST00000527920 N6AMT1Q9Y5N5 214 aa27.7■■■□□ 2.02
SSSCA1-205ENST00000527920 G3V2T6 193 aa27.69■■■□□ 2.02
SSSCA1-205ENST00000527920 TBX1O43435 398 aa27.69■■■□□ 2.02
SSSCA1-205ENST00000527920 FAM20BO75063 409 aa27.69■■■□□ 2.02
SSSCA1-205ENST00000527920 FAM3AP98173 230 aa27.69■■■□□ 2.02
SSSCA1-205ENST00000527920 PTGES3Q15185 160 aaKnown RBP27.69■■■□□ 2.02
SSSCA1-205ENST00000527920 ZDHHC13Q8IUH4 622 aa27.69■■■□□ 2.02
SSSCA1-205ENST00000527920 SGK3Q96BR1 496 aa27.69■■■□□ 2.02
SSSCA1-205ENST00000527920 REEP6Q96HR9 211 aa27.69■■■□□ 2.02
SSSCA1-205ENST00000527920 GABARAPL1Q9H0R8 117 aa27.69■■■□□ 2.02
SSSCA1-205ENST00000527920 OR10A2Q9H208 303 aa27.69■■■□□ 2.02
SSSCA1-205ENST00000527920 PPIAL4AQ9Y536 164 aa27.69■■■□□ 2.02
SSSCA1-205ENST00000527920 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP27.68■■■□□ 2.02
SSSCA1-205ENST00000527920 SEC61A1P61619 476 aaKnown RBP27.68■■■□□ 2.02
SSSCA1-205ENST00000527920 RPS7P62081 194 aaKnown RBP27.68■■■□□ 2.02
SSSCA1-205ENST00000527920 MPPED2Q15777 294 aa27.68■■■□□ 2.02
SSSCA1-205ENST00000527920 PRAMEF6Q5VXH4 476 aa27.68■■■□□ 2.02
SSSCA1-205ENST00000527920 FAM57BQ71RH2 274 aa27.68■■■□□ 2.02
SSSCA1-205ENST00000527920 HIST2H2ABQ8IUE6 130 aaPredicted RBP27.68■■■□□ 2.02
SSSCA1-205ENST00000527920 NANPQ8TBE9 248 aa27.68■■■□□ 2.02
SSSCA1-205ENST00000527920 THEM6Q8WUY1 208 aa27.68■■■□□ 2.02
SSSCA1-205ENST00000527920 TMEM246Q9BRR3 403 aa27.68■■■□□ 2.02
SSSCA1-205ENST00000527920 YIPF3Q9GZM5 350 aa27.68■■■□□ 2.02
SSSCA1-205ENST00000527920 KRT84Q9NSB2 600 aa27.68■■■□□ 2.02
SSSCA1-205ENST00000527920 DNAJC27Q9NZQ0 273 aa27.68■■■□□ 2.02
SSSCA1-205ENST00000527920 hCG_38984A0A1B0GV85 526 aa27.67■■■□□ 2.02
SSSCA1-205ENST00000527920 FSHBP01225 129 aa27.67■■■□□ 2.02
SSSCA1-205ENST00000527920 RPS2P15880 293 aaKnown RBP27.67■■■□□ 2.02
SSSCA1-205ENST00000527920 ZNF12P17014 697 aa27.67■■■□□ 2.02
SSSCA1-205ENST00000527920 ALOX5APP20292 161 aa27.67■■■□□ 2.02
SSSCA1-205ENST00000527920 NAA10P41227 235 aaPredicted RBP27.67■■■□□ 2.02
SSSCA1-205ENST00000527920 APOFQ13790 326 aa27.67■■■□□ 2.02
SSSCA1-205ENST00000527920 LCN1P1Q5VSP4 162 aa27.67■■■□□ 2.02
SSSCA1-205ENST00000527920 KDM4DQ6B0I6 523 aa27.67■■■□□ 2.02
SSSCA1-205ENST00000527920 DEFB108BQ8NET1 73 aa27.67■■■□□ 2.02
SSSCA1-205ENST00000527920 C14orf119Q9NWQ9 140 aa27.67■■■□□ 2.02
SSSCA1-205ENST00000527920 ENOPH1Q9UHY7 261 aa27.67■■■□□ 2.02
SSSCA1-205ENST00000527920 ANKRD30BLA7E2S9 258 aa27.66■■■□□ 2.02
SSSCA1-205ENST00000527920 ZNF205O95201 554 aa27.66■■■□□ 2.02
SSSCA1-205ENST00000527920 EPHA1P21709 976 aa27.66■■■□□ 2.02
SSSCA1-205ENST00000527920 SNCBQ16143 134 aa27.66■■■□□ 2.02
SSSCA1-205ENST00000527920 TEAD3Q99594 435 aa27.66■■■□□ 2.02
SSSCA1-205ENST00000527920 C19orf24Q9BVV8 132 aa27.66■■■□□ 2.02
SSSCA1-205ENST00000527920 OCEL1Q9H607 264 aa27.66■■■□□ 2.02
SSSCA1-205ENST00000527920 UFSP2Q9NUQ7 469 aa27.66■■■□□ 2.02
SSSCA1-205ENST00000527920 RNF7Q9UBF6 113 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms