RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 SRD5A2P31213 254 aa13.53□□□□□ -0.24
USH1C-207ENST00000527720 S100A11P31949 105 aa13.53□□□□□ -0.24
USH1C-207ENST00000527720 P2RX3P56373 397 aa13.53□□□□□ -0.24
USH1C-207ENST00000527720 ENDOGQ14249 297 aaKnown RBP13.53□□□□□ -0.24
USH1C-207ENST00000527720 GLIPR1L1Q6UWM5 242 aa13.53□□□□□ -0.24
USH1C-207ENST00000527720 Q6ZSR3 168 aa13.53□□□□□ -0.24
USH1C-207ENST00000527720 NABP1Q96AH0 204 aa13.53□□□□□ -0.24
USH1C-207ENST00000527720 PGAM5Q96HS1 289 aa13.53□□□□□ -0.24
USH1C-207ENST00000527720 C1orf147Q96MC9 270 aaPredicted RBP13.53□□□□□ -0.24
USH1C-207ENST00000527720 JSRP1Q96MG2 331 aaPredicted RBP13.53□□□□□ -0.24
USH1C-207ENST00000527720 SFXN2Q96NB2 322 aa13.53□□□□□ -0.24
USH1C-207ENST00000527720 ZNF385AQ96PM9 386 aaKnown RBP13.53□□□□□ -0.24
USH1C-207ENST00000527720 GSX2Q9BZM3 304 aa13.53□□□□□ -0.24
USH1C-207ENST00000527720 LPAR5Q9H1C0 372 aa13.53□□□□□ -0.24
USH1C-207ENST00000527720 IFT46Q9NQC8 304 aa13.53□□□□□ -0.24
USH1C-207ENST00000527720 FOXD3Q9UJU5 478 aaPredicted RBP13.53□□□□□ -0.24
USH1C-207ENST00000527720 SIX6O95475 246 aa13.52□□□□□ -0.24
USH1C-207ENST00000527720 ECH1Q13011 328 aa13.52□□□□□ -0.24
USH1C-207ENST00000527720 SCGB2B2Q4G0G5 96 aa13.52□□□□□ -0.24
USH1C-207ENST00000527720 DCAF12Q5T6F0 453 aa13.52□□□□□ -0.24
USH1C-207ENST00000527720 C3P1Q6ZMU1 363 aa13.52□□□□□ -0.24
USH1C-207ENST00000527720 TMED4Q7Z7H5 227 aa13.52□□□□□ -0.24
USH1C-207ENST00000527720 OR4S1Q8NGB4 309 aa13.52□□□□□ -0.24
USH1C-207ENST00000527720 KCNE4Q8WWG9 221 aa13.52□□□□□ -0.24
USH1C-207ENST00000527720 CMBLQ96DG6 245 aa13.52□□□□□ -0.24
USH1C-207ENST00000527720 GHRLQ9UBU3 117 aa13.52□□□□□ -0.24
USH1C-207ENST00000527720 A0A0J9YW62 118 aa13.52□□□□□ -0.25
USH1C-207ENST00000527720 WDPCPO95876 746 aa13.52□□□□□ -0.25
USH1C-207ENST00000527720 CFDP00746 253 aaPredicted RBP13.52□□□□□ -0.25
USH1C-207ENST00000527720 HCKP08631 526 aa13.52□□□□□ -0.25
USH1C-207ENST00000527720 OTX1P32242 354 aaPredicted RBP13.52□□□□□ -0.25
USH1C-207ENST00000527720 THBS4P35443 961 aa13.52□□□□□ -0.25
USH1C-207ENST00000527720 CASRP41180 1078 aa13.52□□□□□ -0.25
USH1C-207ENST00000527720 ZNF84P51523 738 aa13.52□□□□□ -0.25
USH1C-207ENST00000527720 UBE2MP61081 183 aaKnown RBP13.52□□□□□ -0.25
USH1C-207ENST00000527720 CXADRP78310 365 aa13.52□□□□□ -0.25
USH1C-207ENST00000527720 SRSF4Q08170 494 aaKnown RBP13.52□□□□□ -0.25
USH1C-207ENST00000527720 SIGLEC14Q08ET2 396 aa13.52□□□□□ -0.25
USH1C-207ENST00000527720 PHYHD1Q5SRE7 291 aa13.52□□□□□ -0.25
USH1C-207ENST00000527720 DCAF12L2Q5VW00 463 aa13.52□□□□□ -0.25
USH1C-207ENST00000527720 FAHD2BQ6P2I3 314 aaPredicted RBP13.52□□□□□ -0.25
USH1C-207ENST00000527720 SLC25A42Q86VD7 318 aa13.52□□□□□ -0.25
USH1C-207ENST00000527720 C10orf35Q96D05 121 aa13.52□□□□□ -0.25
USH1C-207ENST00000527720 WDR89Q96FK6 387 aaPredicted RBP13.52□□□□□ -0.25
USH1C-207ENST00000527720 FAHD2AQ96GK7 314 aa13.52□□□□□ -0.25
USH1C-207ENST00000527720 SOX7Q9BT81 388 aa13.52□□□□□ -0.25
USH1C-207ENST00000527720 SELENOIQ9C0D9 397 aa13.52□□□□□ -0.25
USH1C-207ENST00000527720 PADI1Q9ULC6 663 aa13.52□□□□□ -0.25
USH1C-207ENST00000527720 ANAPC10Q9UM13 185 aa13.52□□□□□ -0.25
USH1C-207ENST00000527720 FLVCR1Q9Y5Y0 555 aa13.52□□□□□ -0.25
USH1C-207ENST00000527720 CDC14BO60729 498 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 P04436 131 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 ZNF883P0CG24 379 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 PRF1P14222 555 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 GNB3P16520 340 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 ENPP1P22413 925 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 ALDH3B1P43353 468 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 RAC3P60763 192 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 DHRS2Q13268 280 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 PNLIPRP3Q17RR3 467 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 B3GNTL1Q67FW5 361 aaPredicted RBP13.51□□□□□ -0.25
USH1C-207ENST00000527720 NUDCD2Q8WVJ2 157 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 UCN2Q96RP3 112 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 ZPBPQ9BS86 351 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 TMEM59Q9BXS4 323 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 KCNN3Q9UGI6 736 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 KIF25Q9UIL4 384 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 V9GYS6 101 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 NCKAP5O14513 1909 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 IGHV3-15A0A0B4J1V0 119 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 RFPL4AA6NLU0 287 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 RFPL4AL1F8VTS6 287 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 DHRS3O75911 302 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 STK17BO94768 372 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 CD8AP01732 235 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 NAT1P18440 290 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 FGL1Q08830 312 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 GK2Q14410 553 aaPredicted RBP13.51□□□□□ -0.25
USH1C-207ENST00000527720 HYAL4Q2M3T9 481 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 ZNF528Q3MIS6 628 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 NHLRC3Q5JS37 347 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 H3F3CQ6NXT2 135 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 TMUB2Q71RG4 321 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 PPP1R32Q7Z5V6 425 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 NAA40Q86UY6 237 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 CD163Q86VB7 1156 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 C20orf196Q8IYI0 205 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 BEST3Q8N1M1 668 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 ZIC4Q8N9L1 334 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 PNLDC1Q8NA58 520 aaKnown RBP13.51□□□□□ -0.25
USH1C-207ENST00000527720 OR56B1Q8NGI3 324 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 PP6455Q8WZ26 134 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 URM1Q9BTM9 101 aaKnown RBP13.51□□□□□ -0.25
USH1C-207ENST00000527720 TCFL5Q9UL49 500 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 KCNK7Q9Y2U2 307 aa13.51□□□□□ -0.25
USH1C-207ENST00000527720 G3V3Y1 287 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 TNFSF11O14788 317 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 ARPC5O15511 151 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 RP2O75695 350 aa13.5□□□□□ -0.25
USH1C-207ENST00000527720 HPP00738 406 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms