RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 SCCPDHQ8NBX0 429 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 NPEPL1Q8NDH3 523 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 OR5L1Q8NGL2 311 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 LINC01006Q8NI28 216 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 TBC1D15Q8TC07 691 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 GNPDA2Q8TDQ7 276 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 GIPC3Q8TF64 312 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 PYDC1Q8WXC3 89 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 ITPKCQ96DU7 683 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 ZNF570Q96NI8 536 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 TBX15Q96SF7 602 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 CITED1Q99966 193 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 C9orf16Q9BUW7 83 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 NUAK2Q9H093 628 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 GABARAPL1Q9H0R8 117 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 SYT4Q9H2B2 425 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 SEMA6AQ9H2E6 1030 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 MMP27Q9H306 513 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 ZNF556Q9HAH1 456 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 ERVK-18Q9QC07 812 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 TRBV4-1A0A0J9YWV2 114 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 A0A1B0GUS0 222 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 PRSS37A4D1T9 235 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 C5orf63A6NC05 138 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 ZNF879B4DU55 563 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 G3V4G9 280 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 H3BNX3 289 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 DCTN6O00399 190 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 ENSAO43768 121 aaKnown RBP5.45□□□□□ -1.54
CD44-221ENST00000526000 TIPRLO75663 272 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 DIRAS1O95057 198 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 LCATP04180 440 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 CD14P08571 375 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 CA6P23280 308 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 CFHR2P36980 270 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 CDKN2AP42771 156 aaKnown RBP5.45□□□□□ -1.54
CD44-221ENST00000526000 OMPP47874 163 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 GSSP48637 474 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 GMFBP60983 142 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 RSPO1Q2MKA7 263 aaPredicted RBP5.45□□□□□ -1.54
CD44-221ENST00000526000 ZBED5Q49AG3 693 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 FAM205BPQ63HN1 556 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 ZNF770Q6IQ21 691 aaPredicted RBP5.45□□□□□ -1.54
CD44-221ENST00000526000 Q6ZSV7 163 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 RASSF6Q6ZTQ3 369 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 C9orf139Q6ZV77 190 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 PTCHD4Q6ZW05 846 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 SYT9Q86SS6 491 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 C1orf87Q8N0U7 546 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 LYG1Q8N1E2 194 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 PACRGLQ8N7B6 248 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 OR10G2Q8NGC3 310 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 OR11L1Q8NGX0 322 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 OR52J3Q8NH60 311 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 FNDC8Q8TC99 324 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 SPRYD4Q8WW59 207 aaPredicted RBP5.45□□□□□ -1.54
CD44-221ENST00000526000 LRTOMTQ8WZ04 291 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 DACT3Q96B18 629 aaPredicted RBP5.45□□□□□ -1.54
CD44-221ENST00000526000 SEH1LQ96EE3 360 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 FAM46AQ96IP4 442 aaKnown RBP5.45□□□□□ -1.54
CD44-221ENST00000526000 FAM71F1Q96KD3 344 aaPredicted RBP5.45□□□□□ -1.54
CD44-221ENST00000526000 RDH12Q96NR8 316 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 WDFY2Q96P53 400 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 GPX7Q96SL4 187 aaPredicted RBP5.45□□□□□ -1.54
CD44-221ENST00000526000 PITX2Q99697 317 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 HCAR1Q9BXC0 346 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 TEX12Q9BXU0 123 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 VCXQ9H320 206 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 VCX3BQ9H321 246 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 SMURF1Q9HCE7 757 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 NOX4Q9NPH5 578 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 ACOXLQ9NUZ1 547 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 CTSZQ9UBR2 303 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 BAIAP2Q9UQB8 552 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 SIGLEC9Q9Y336 463 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 ORC6Q9Y5N6 252 aa5.45□□□□□ -1.54
CD44-221ENST00000526000 NOTCH1P46531 2555 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 IGHV1-69DA0A0B4J2H0 117 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 ZNF816-ZNF321PA0A0X1KG74 233 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 hCG_1807616A0A1W2PRN6 198 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 OR6C6A6NF89 314 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 UNC119BA6NIH7 251 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 SLC22A31A6NKX4 558 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 A6NLC8 198 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 IQCF6A8MYZ5 107 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 G3V2T6 193 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 IFNL4K9M1U5 179 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 LGALS8O00214 317 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 P2RY10O00398 339 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 TNFRSF13BO14836 293 aaPredicted RBP5.44□□□□□ -1.54
CD44-221ENST00000526000 CASQ2O14958 399 aaPredicted RBP5.44□□□□□ -1.54
CD44-221ENST00000526000 IDH3BO43837 385 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 AHCYL1O43865 530 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 ICMTO60725 284 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 PTP4A3O75365 173 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 NDUFB2O95178 105 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 NDUFA7O95182 113 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 PPP1R3DO95685 299 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 IGHV1-69P01742 117 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 PPIAL4GP0DN37 164 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms