RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 KBTBD11-OT1A0A1B0GTJ5 212 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 TSPAN11A1L157 253 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 MT-ND4P03905 459 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 NTF3P20783 257 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 RAB7AP51149 207 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 FABP6P51161 128 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 UBE2E1P51965 193 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 CMC4P56277 68 aaPredicted RBP2.01□□□□□ -2.09
CD44-215ENST00000525241 FLI1Q01543 452 aaPredicted RBP2.01□□□□□ -2.09
CD44-215ENST00000525241 DMC1Q14565 340 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 SPANXN2Q5MJ10 180 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 CASP12Q6UXS9 341 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 RTL4Q6ZR62 310 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 HORMAD1Q86X24 394 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 GABRG1Q8N1C3 465 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 TMEM104Q8NE00 496 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 C1orf64Q8NEQ6 169 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 OR10W1Q8NGF6 305 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 OR56A4Q8NGH8 313 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 N4BP2L2Q92802 583 aaPredicted RBP2.01□□□□□ -2.09
CD44-215ENST00000525241 KCNS1Q96KK3 526 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 GSDMAQ96QA5 445 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 UQCC2Q9BRT2 126 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 ANGPTL4Q9BY76 406 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 TOLLIPQ9H0E2 274 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 RGS18Q9NS28 235 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 GCNT4Q9P109 453 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 CLN8Q9UBY8 286 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 RRP15Q9Y3B9 282 aaKnown RBP2.01□□□□□ -2.09
CD44-215ENST00000525241 UBIAD1Q9Y5Z9 338 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
CD44-215ENST00000525241 KCNE1BA0A087WTH5 132 aa2□□□□□ -2.09
CD44-215ENST00000525241 CEACAM18A8MTB9 384 aa2□□□□□ -2.09
CD44-215ENST00000525241 DNALI1O14645 258 aaPredicted RBP2□□□□□ -2.09
CD44-215ENST00000525241 RAD1O60671 282 aa2□□□□□ -2.09
CD44-215ENST00000525241 FGFR1OPO95684 399 aaKnown RBP2□□□□□ -2.09
CD44-215ENST00000525241 ERCC1P07992 297 aaPredicted RBP2□□□□□ -2.09
CD44-215ENST00000525241 P0C880 135 aa2□□□□□ -2.09
CD44-215ENST00000525241 TGFBR1P36897 503 aa2□□□□□ -2.09
CD44-215ENST00000525241 MYCNOSP40205 109 aa2□□□□□ -2.09
CD44-215ENST00000525241 RFC3P40938 356 aa2□□□□□ -2.09
CD44-215ENST00000525241 TNFSF9P41273 254 aa2□□□□□ -2.09
CD44-215ENST00000525241 RPS11P62280 158 aaKnown RBP eCLIP2□□□□□ -2.09
CD44-215ENST00000525241 BEX3Q00994 111 aa2□□□□□ -2.09
CD44-215ENST00000525241 MEF2BQ02080 365 aaPredicted RBP2□□□□□ -2.09
CD44-215ENST00000525241 MERTKQ12866 999 aa2□□□□□ -2.09
CD44-215ENST00000525241 FAM53BQ14153 422 aa2□□□□□ -2.09
CD44-215ENST00000525241 ZNF829Q3KNS6 432 aaPredicted RBP2□□□□□ -2.09
CD44-215ENST00000525241 SPIN3Q5JUX0 258 aa2□□□□□ -2.09
CD44-215ENST00000525241 LUZP2Q86TE4 346 aa2□□□□□ -2.09
CD44-215ENST00000525241 MDP1Q86V88 176 aa2□□□□□ -2.09
CD44-215ENST00000525241 ERO1BQ86YB8 467 aa2□□□□□ -2.09
CD44-215ENST00000525241 BBS5Q8N3I7 341 aa2□□□□□ -2.09
CD44-215ENST00000525241 PQLC3Q8N755 202 aa2□□□□□ -2.09
CD44-215ENST00000525241 OR5AR1Q8NGP9 310 aa2□□□□□ -2.09
CD44-215ENST00000525241 OR1L1Q8NH94 360 aa2□□□□□ -2.09
CD44-215ENST00000525241 RXFP4Q8TDU9 374 aa2□□□□□ -2.09
CD44-215ENST00000525241 SGTBQ96EQ0 304 aa2□□□□□ -2.09
CD44-215ENST00000525241 DYNLL2Q96FJ2 89 aa2□□□□□ -2.09
CD44-215ENST00000525241 NUDT9Q9BW91 350 aa2□□□□□ -2.09
CD44-215ENST00000525241 DCAF16Q9NXF7 216 aa2□□□□□ -2.09
CD44-215ENST00000525241 IGKV2-24A0A0C4DH68 120 aa1.99□□□□□ -2.09
CD44-215ENST00000525241 GLAP06280 429 aa1.99□□□□□ -2.09
CD44-215ENST00000525241 GABRG2P18507 467 aa1.99□□□□□ -2.09
CD44-215ENST00000525241 MYL9P24844 172 aa1.99□□□□□ -2.09
CD44-215ENST00000525241 NBL1P41271 181 aa1.99□□□□□ -2.09
CD44-215ENST00000525241 PPICP45877 212 aa1.99□□□□□ -2.09
CD44-215ENST00000525241 SERPINB8P50452 374 aa1.99□□□□□ -2.09
CD44-215ENST00000525241 UBE2MP61081 183 aaKnown RBP1.99□□□□□ -2.09
CD44-215ENST00000525241 ELF3P78545 371 aaPredicted RBP1.99□□□□□ -2.09
CD44-215ENST00000525241 ILKQ13418 452 aa1.99□□□□□ -2.09
CD44-215ENST00000525241 MAD2L1BPQ15013 274 aaPredicted RBP1.99□□□□□ -2.09
CD44-215ENST00000525241 RCN1Q15293 331 aa1.99□□□□□ -2.09
CD44-215ENST00000525241 TAF9Q16594 264 aa1.99□□□□□ -2.09
CD44-215ENST00000525241 TRMT5Q32P41 509 aaKnown RBP1.99□□□□□ -2.09
CD44-215ENST00000525241 KLHL12Q53G59 568 aa1.99□□□□□ -2.09
CD44-215ENST00000525241 PRSS54Q6PEW0 395 aa1.99□□□□□ -2.09
CD44-215ENST00000525241 CD300LGQ6UXG3 332 aa1.99□□□□□ -2.09
CD44-215ENST00000525241 TMEM136Q6ZRR5 245 aa1.99□□□□□ -2.09
CD44-215ENST00000525241 STK40Q8N2I9 435 aa1.99□□□□□ -2.09
CD44-215ENST00000525241 JAGN1Q8N5M9 183 aa1.99□□□□□ -2.09
CD44-215ENST00000525241 BPIFCQ8NFQ6 507 aa1.99□□□□□ -2.09
CD44-215ENST00000525241 OR52E5Q8NH55 327 aa1.99□□□□□ -2.09
CD44-215ENST00000525241 OR4K3Q96R72 315 aa1.99□□□□□ -2.09
CD44-215ENST00000525241 LINC00574Q9H8X3 128 aa1.99□□□□□ -2.09
CD44-215ENST00000525241 CSNK1G1Q9HCP0 422 aa1.99□□□□□ -2.09
CD44-215ENST00000525241 FARSAQ9Y285 508 aaKnown RBP1.99□□□□□ -2.09
CD44-215ENST00000525241 CARHSP1Q9Y2V2 147 aaKnown RBP1.99□□□□□ -2.09
CD44-215ENST00000525241 A0A075B6Q4 140 aa1.98□□□□□ -2.09
CD44-215ENST00000525241 CTAGE15A4D2H0 777 aa1.98□□□□□ -2.09
CD44-215ENST00000525241 ANKRD65E5RJM6 399 aa1.98□□□□□ -2.09
CD44-215ENST00000525241 ERI3O43414 337 aaKnown RBP1.98□□□□□ -2.09
CD44-215ENST00000525241 GATBO75879 557 aaKnown RBP1.98□□□□□ -2.09
CD44-215ENST00000525241 TGM6O95932 706 aa1.98□□□□□ -2.09
CD44-215ENST00000525241 IGKV1D-16P01601 117 aa1.98□□□□□ -2.09
CD44-215ENST00000525241 IGLV2-8P01709 118 aa1.98□□□□□ -2.09
CD44-215ENST00000525241 RPN2P04844 631 aa1.98□□□□□ -2.09
CD44-215ENST00000525241 HMOX2P30519 316 aa1.98□□□□□ -2.09
CD44-215ENST00000525241 GGT2P36268 569 aa1.98□□□□□ -2.09
CD44-215ENST00000525241 IDH2P48735 452 aaKnown RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms