RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 DOK1Q99704 481 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 PDCD1LG2Q9BQ51 273 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 WACQ9BTA9 647 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 PBOV1Q9GZY1 135 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 ESRP2Q9H6T0 727 aaKnown RBP5.54□□□□□ -1.52
CD44-214ENST00000525211 ATPIF1Q9UII2 106 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 PLEKHA6Q9Y2H5 1048 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 R4GMQ9 66 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 CSMD1Q96PZ7 3565 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 AKAP9Q99996 3911 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 IGLV3-9A0A075B6K5 115 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 hCG_38984A0A1B0GV85 526 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 TMEM269A0A1B0GVZ9 245 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 ANKRD61A6NGH8 418 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 ZSCAN5BA6NJL1 495 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 LOC110117498-PIK3R3F6TDL0 507 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 FAM229AH3BQW9 127 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 OGG1O15527 345 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 RGS10O43665 173 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 NCR1O76036 304 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 INMTO95050 263 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 ZNF250P15622 560 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 SELEP16581 610 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 LORP23490 312 aaPredicted RBP5.53□□□□□ -1.52
CD44-214ENST00000525211 DCKP27707 260 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 HSD11B1P28845 292 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 PCSK6P29122 969 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 GLRXP35754 106 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 CDKN1AP38936 164 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 MMP15P51511 669 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 NR1H2P55055 460 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 GP2P55259 537 aaKnown RBP5.53□□□□□ -1.52
CD44-214ENST00000525211 TPTEP56180 551 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 RPS11P62280 158 aaKnown RBP eCLIP5.53□□□□□ -1.52
CD44-214ENST00000525211 GRB2P62993 217 aaKnown RBP5.53□□□□□ -1.52
CD44-214ENST00000525211 FAM3AP98173 230 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 EMX1Q04741 257 aaPredicted RBP5.53□□□□□ -1.52
CD44-214ENST00000525211 ALKBH1Q13686 389 aaKnown RBP5.53□□□□□ -1.52
CD44-214ENST00000525211 SSX1Q16384 188 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 DEGS2Q6QHC5 323 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 DRAM2Q6UX65 266 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 ELMOD2Q8IZ81 293 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 BHLHE23Q8NDY6 225 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 OR56B2PQ8NGI1 322 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 SNX33Q8WV41 574 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 MRPL24Q96A35 216 aaKnown RBP5.53□□□□□ -1.52
CD44-214ENST00000525211 SPSB4Q96A44 273 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 HAVCR1Q96D42 359 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 TRMT61AQ96FX7 289 aaKnown RBP5.53□□□□□ -1.52
CD44-214ENST00000525211 REEP6Q96HR9 211 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 PGAM5Q96HS1 289 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 FAM71F1Q96KD3 344 aaPredicted RBP5.53□□□□□ -1.52
CD44-214ENST00000525211 PGLYRP3Q96LB9 341 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 OPALINQ96PE5 141 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 MNTQ99583 582 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 NKX3-1Q99801 234 aaPredicted RBP5.53□□□□□ -1.52
CD44-214ENST00000525211 DHRS9Q9BPW9 319 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 TRAF4Q9BUZ4 470 aaPredicted RBP5.53□□□□□ -1.52
CD44-214ENST00000525211 CDCA4Q9BXL8 241 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 CCDC90BQ9GZT6 254 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 TPK1Q9H3S4 243 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 MSL2Q9HCI7 577 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 GPR84Q9NQS5 396 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 TBCCD1Q9NVR7 557 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 DCAF16Q9NXF7 216 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 TAAR3PQ9P1P4 343 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 NUFIP1Q9UHK0 495 aaKnown RBP5.53□□□□□ -1.52
CD44-214ENST00000525211 DUSP13Q9UII6 198 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 PURGQ9UJV8 347 aaKnown RBP5.53□□□□□ -1.52
CD44-214ENST00000525211 POU2F3Q9UKI9 436 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 OR52A1Q9UKL2 312 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 GTF2A1LQ9UNN4 478 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 CAB39Q9Y376 341 aaPredicted RBP5.53□□□□□ -1.52
CD44-214ENST00000525211 EXOSC1Q9Y3B2 195 aaKnown RBP5.53□□□□□ -1.52
CD44-214ENST00000525211 TMEM14AQ9Y6G1 99 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 PDZD2O15018 2839 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 APCP25054 2843 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 CENPEQ02224 2701 aa5.53□□□□□ -1.52
CD44-214ENST00000525211 DSCAMO60469 2012 aa5.52□□□□□ -1.53
CD44-214ENST00000525211 TRIM64CA6NLI5 447 aa5.52□□□□□ -1.53
CD44-214ENST00000525211 LYNX1G3V0Z9 82 aa5.52□□□□□ -1.53
CD44-214ENST00000525211 OVOL3O00110 214 aa5.52□□□□□ -1.53
CD44-214ENST00000525211 PIN1P1O15428 100 aa5.52□□□□□ -1.53
CD44-214ENST00000525211 MLNRO43193 412 aa5.52□□□□□ -1.53
CD44-214ENST00000525211 WIPF1O43516 503 aa5.52□□□□□ -1.53
CD44-214ENST00000525211 ZNF254O75437 659 aa5.52□□□□□ -1.53
CD44-214ENST00000525211 SULT1C4O75897 302 aa5.52□□□□□ -1.53
CD44-214ENST00000525211 ZFPL1O95159 310 aa5.52□□□□□ -1.53
CD44-214ENST00000525211 ATE1O95260 518 aa5.52□□□□□ -1.53
CD44-214ENST00000525211 BPNT1O95861 308 aa5.52□□□□□ -1.53
CD44-214ENST00000525211 HLA-DPB1P04440 258 aa5.52□□□□□ -1.53
CD44-214ENST00000525211 KRT8P05787 483 aa5.52□□□□□ -1.53
CD44-214ENST00000525211 LYNX1P0DP58 116 aa5.52□□□□□ -1.53
CD44-214ENST00000525211 NAT2P11245 290 aa5.52□□□□□ -1.53
CD44-214ENST00000525211 APOBEC3AP31941 199 aaPredicted RBP5.52□□□□□ -1.53
CD44-214ENST00000525211 TTKP33981 857 aa5.52□□□□□ -1.53
CD44-214ENST00000525211 SERPINF1P36955 418 aa5.52□□□□□ -1.53
CD44-214ENST00000525211 PEX19P40855 299 aa5.52□□□□□ -1.53
CD44-214ENST00000525211 PMELP40967 661 aa5.52□□□□□ -1.53
CD44-214ENST00000525211 GSK3AP49840 483 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms