RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 MYL5Q02045 173 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 CUL1Q13616 776 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 DDX39BQ13838 428 aaKnown RBP1.15□□□□□ -2.23
CD44-212ENST00000524922 DOC2AQ14183 400 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 POU6F1Q14863 301 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 HEPACAMQ14CZ8 416 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 TGFBIQ15582 683 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 UAP1Q16222 522 aaPredicted RBP1.15□□□□□ -2.23
CD44-212ENST00000524922 TPD52L1Q16890 204 aaPredicted RBP1.15□□□□□ -2.23
CD44-212ENST00000524922 UTF1Q5T230 341 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 RSBN1Q5VWQ0 802 aaPredicted RBP1.15□□□□□ -2.23
CD44-212ENST00000524922 STEAP4Q687X5 459 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 NCR3LG1Q68D85 454 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 LGALS9CQ6DKI2 356 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 KLHL10Q6JEL2 608 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 FAM45BPQ6NSW5 357 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 SLC27A4Q6P1M0 643 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 MED27Q6P2C8 311 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 C6orf89Q6UWU4 347 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 MFSD7Q6UXD7 560 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 NPSR1Q6W5P4 371 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 PIWIL3Q7Z3Z3 882 aaKnown RBP1.15□□□□□ -2.23
CD44-212ENST00000524922 PIGWQ7Z7B1 504 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 WDFY1Q8IWB7 410 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 ZNF100Q8IYN0 542 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 CD177Q8N6Q3 437 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 ZNF321PQ8N8H1 164 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 CDRT4Q8N9R6 151 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 THAP8Q8NA92 274 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 FAM71CQ8NEG0 241 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 OR7G3Q8NG95 312 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 OR10G7Q8NGN6 311 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 OR1K1Q8NGR3 316 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 PSMA8Q8TAA3 256 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 C8orf46Q8TAG6 207 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 ACTL9Q8TC94 416 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 FAM45AQ8TCE6 357 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 GRK7Q8WTQ7 553 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 TMEM234Q8WY98 164 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 BCL2L2Q92843 193 aaPredicted RBP1.15□□□□□ -2.23
CD44-212ENST00000524922 YIPF5Q969M3 257 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 TMBIM1Q969X1 311 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 TMEM106AQ96A25 262 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 C12orf43Q96C57 262 aaKnown RBP1.15□□□□□ -2.23
CD44-212ENST00000524922 LRRC39Q96DD0 335 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 ZNF75AQ96N20 296 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 MS4A10Q96PG2 267 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 CDRT15Q96T59 188 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 PITX2Q99697 317 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 MAPKAP1Q9BPZ7 522 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 CHCHD6Q9BRQ6 235 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 MRPL1Q9BYD6 325 aaKnown RBP1.15□□□□□ -2.23
CD44-212ENST00000524922 TBL1XR1Q9BZK7 514 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 CHIAQ9BZP6 476 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 ZNF350Q9GZX5 532 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 NAT10Q9H0A0 1025 aaKnown RBP1.15□□□□□ -2.23
CD44-212ENST00000524922 DNTTIP1Q9H147 329 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 GOLPH3Q9H4A6 298 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 C12orf10Q9HB07 376 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 EQTNQ9NQ60 294 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 ACOXLQ9NUZ1 547 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 CLEC5AQ9NY25 188 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 B3GNT2Q9NY97 397 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 AASSQ9UDR5 926 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 IL19Q9UHD0 177 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 CIDEBQ9UHD4 219 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 PITPNC1Q9UKF7 332 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 GTF2A1LQ9UNN4 478 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 RASD1Q9Y272 281 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 WDR83OSQ9Y284 106 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 STK38LQ9Y2H1 464 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 NOSIPQ9Y314 301 aaKnown RBP1.15□□□□□ -2.23
CD44-212ENST00000524922 PLLPQ9Y342 182 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 NOP16Q9Y3C1 178 aaKnown RBP1.15□□□□□ -2.23
CD44-212ENST00000524922 TSSC4Q9Y5U2 329 aaPredicted RBP1.15□□□□□ -2.23
CD44-212ENST00000524922 FLVCR1Q9Y5Y0 555 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 NPTNQ9Y639 398 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 TEX264Q9Y6I9 313 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 EXPH5Q8NEV8 1989 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 HEATR5AQ86XA9 2040 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 MUC19Q7Z5P9 8384 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 MUC4Q99102 2169 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 A0A087X0T9 212 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 IGLV1-36A0A0B4J1U3 117 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 TRAV40A0A0B4J280 105 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 IGHV1-69DA0A0B4J2H0 117 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 IGHV3-16A0A0C4DH30 117 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 TRBV4-1A0A0J9YWV2 114 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 ZNF816-ZNF321PA0A0X1KG74 233 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 FAM168BA1KXE4 195 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 NKX6-3A6NJ46 265 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 LRRC30A6NM36 301 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 SYCE1LA8MT33 242 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 IQCF5A8MTL0 148 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 A8MUA0 341 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 FAM220BPB1ANY3 271 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 H0YL77 283 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 J3KRW8 73 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 K7EQG2 157 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 M0R1B8 84 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms