RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 RAB1AP62820 205 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 FAM78AQ5JUQ0 283 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 ACER2Q5QJU3 275 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 OR2A2Q6IF42 318 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 DRAM2Q6UX65 266 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 CHRDL2Q6WN34 429 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 DGAT2L6Q6ZPD8 337 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 AVL9Q8NBF6 648 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 TMEM104Q8NE00 496 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 OCSTAMPQ9BR26 566 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 DNAJB11Q9UBS4 358 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 ZNF107Q9UII5 783 aaPredicted RBP8.09□□□□□ -1.11
CSMD1-212ENST00000523387 SLC17A4Q9Y2C5 497 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 TMED7-TICAM2A0A0A6YYA0 188 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 CCDC163A0A0D9SF12 145 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 FAM230AA0A1W2PPH8 454 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 RAB27BO00194 218 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 BPNT1O95861 308 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 ALDH3B1P43353 468 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 CSRP2Q16527 193 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 PHF19Q5T6S3 580 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 C1QL3Q5VWW1 255 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 FAM160A2Q8N612 972 aaPredicted RBP8.09□□□□□ -1.11
CSMD1-212ENST00000523387 ZNF383Q8NA42 475 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 UBAC2Q8NBM4 344 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 FAM174AQ8TBP5 190 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 OR51E1Q8TCB6 317 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 TMEM234Q8WY98 164 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 VOPP1Q96AW1 172 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 CCNL2Q96S94 520 aaPredicted RBP8.09□□□□□ -1.11
CSMD1-212ENST00000523387 PRRX2Q99811 253 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 OR10A2Q9H208 303 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 OPA3Q9H6K4 179 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 BARX1Q9HBU1 254 aaPredicted RBP8.09□□□□□ -1.11
CSMD1-212ENST00000523387 PDE7BQ9NP56 450 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 TMEM74BQ9NUR3 256 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 DTX4Q9Y2E6 619 aa8.09□□□□□ -1.11
CSMD1-212ENST00000523387 A0A087WZY1 265 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 ZNF587BE7ETH6 402 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 HCRTR1O43613 425 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 SLC34A2O95436 690 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 CXCL10P02778 98 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 CD63P08962 238 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 TMEM225BP0DP42 221 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 TMEM33P57088 247 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 SSTP61278 116 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 HHEXQ03014 270 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 ECH1Q13011 328 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 GPM6BQ13491 265 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 HAGHQ16775 308 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 DEFB115Q30KQ5 88 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 C4orf17Q53FE4 359 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 NEK7Q8TDX7 302 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 HOXB13Q92826 284 aaPredicted RBP8.08□□□□□ -1.12
CSMD1-212ENST00000523387 S1PR5Q9H228 398 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 LHX6Q9UPM6 363 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 SLC5A6Q9Y289 635 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 POMT1Q9Y6A1 747 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 ZNF726A6NNF4 738 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 FGF16O43320 207 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 CLN5O75503 358 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 EML2O95834 649 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 CD1CP29017 333 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 GJA4P35212 333 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 CD226Q15762 336 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 FHL5Q5TD97 284 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 C1orf140Q5VVS0 124 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 SEMA6DQ8NFY4 1073 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 BAHD1Q8TBE0 780 aaPredicted RBP8.08□□□□□ -1.12
CSMD1-212ENST00000523387 THAP3Q8WTV1 239 aaPredicted RBP8.08□□□□□ -1.12
CSMD1-212ENST00000523387 EMG1Q92979 244 aaKnown RBP8.08□□□□□ -1.12
CSMD1-212ENST00000523387 IP6K3Q96PC2 410 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 NIPSNAP3BQ9BS92 247 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 C19orf12Q9NSK7 152 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 COL4A4P53420 1690 aaPredicted RBP8.08□□□□□ -1.12
CSMD1-212ENST00000523387 CYR61O00622 381 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 NDUFS6O75380 124 aaKnown RBP8.08□□□□□ -1.12
CSMD1-212ENST00000523387 ABHD16AO95870 558 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 DAP3P51398 398 aaKnown RBP8.08□□□□□ -1.12
CSMD1-212ENST00000523387 ANKRD9Q96BM1 317 aaPredicted RBP8.08□□□□□ -1.12
CSMD1-212ENST00000523387 RRNAD1Q96FB5 475 aaKnown RBP8.08□□□□□ -1.12
CSMD1-212ENST00000523387 SPSB2Q99619 263 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 SLC35B3Q9H1N7 401 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 TXNIPQ9H3M7 391 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 MYOZ1Q9NP98 299 aaPredicted RBP8.08□□□□□ -1.12
CSMD1-212ENST00000523387 METTL1Q9UBP6 276 aaKnown RBP8.08□□□□□ -1.12
CSMD1-212ENST00000523387 VDAC3Q9Y277 283 aa8.08□□□□□ -1.12
CSMD1-212ENST00000523387 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.07□□□□□ -1.12
CSMD1-212ENST00000523387 COLCA2A8K830 154 aa8.07□□□□□ -1.12
CSMD1-212ENST00000523387 TNFSF12O43508 249 aa8.07□□□□□ -1.12
CSMD1-212ENST00000523387 CD79AP11912 226 aa8.07□□□□□ -1.12
CSMD1-212ENST00000523387 FPR2P25090 351 aa8.07□□□□□ -1.12
CSMD1-212ENST00000523387 ZNF84P51523 738 aa8.07□□□□□ -1.12
CSMD1-212ENST00000523387 SKP2Q13309 424 aa8.07□□□□□ -1.12
CSMD1-212ENST00000523387 ANKRD33Q7Z3H0 272 aa8.07□□□□□ -1.12
CSMD1-212ENST00000523387 ATG4DQ86TL0 474 aaPredicted RBP8.07□□□□□ -1.12
CSMD1-212ENST00000523387 ZNF610Q8N9Z0 462 aa8.07□□□□□ -1.12
CSMD1-212ENST00000523387 LFNGQ8NES3 379 aa8.07□□□□□ -1.12
CSMD1-212ENST00000523387 RPS4Y2Q8TD47 263 aa8.07□□□□□ -1.12
CSMD1-212ENST00000523387 ADAMTS17Q8TE56 1095 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms