RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 HERPUD1Q15011 391 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 RFX4Q33E94 735 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 TMEM155Q4W5P6 130 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 LPCAT4Q643R3 524 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 LRRN1Q6UXK5 716 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 ZNF813Q6ZN06 617 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 VTCN1Q7Z7D3 282 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 ZDHHC21Q8IVQ6 265 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 C20orf196Q8IYI0 205 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 C1orf174Q8IYL3 243 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 GPR137CQ8N3F9 429 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 C11orf44Q8N8P7 122 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 GPR32P1Q8NGA4 272 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 OR4C15Q8NGM1 316 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 ZNF519Q8TB69 540 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 SSMEM1Q8WWF3 244 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 EME1Q96AY2 570 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 FAM71F1Q96KD3 344 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-210ENST00000522843 NR1H4Q96RI1 486 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-210ENST00000522843 ARHGDIGQ99819 225 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 FUZQ9BT04 418 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 KLK15Q9H2R5 256 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 VCXQ9H320 206 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 ANKRD19PQ9H560 264 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 SLCO1C1Q9NYB5 712 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 OR5V1Q9UGF6 321 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 SIGLEC9Q9Y336 463 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 KIR2DS1A0A191URI9 304 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 A0A1W2PRQ8 180 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 SLC22A23A1A5C7 686 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 CEACAM18A8MTB9 384 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 A8MVM7 634 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 G3V2T6 193 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 SOCS2O14508 198 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 TPST1O60507 370 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 RAB36O95755 333 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 ZNF682O95780 498 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 MT-ND5P03915 603 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 IFNW1P05000 195 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 LCKP06239 509 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 BCHEP06276 602 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 DBIP07108 87 aaKnown RBP5.45□□□□□ -1.54
SDCBP-210ENST00000522843 HLA-DOBP13765 273 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 ACAA2P42765 397 aaKnown RBP5.45□□□□□ -1.54
SDCBP-210ENST00000522843 IER3P46695 156 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 ERFP50548 548 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 RPS6KA3P51812 740 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 ARHGDIAP52565 204 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 UCP2P55851 309 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 FGF12P61328 243 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 ADARB1P78563 741 aaKnown RBP5.45□□□□□ -1.54
SDCBP-210ENST00000522843 EGR4Q05215 589 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 SLC3A1Q07837 685 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 DGCR6Q14129 220 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 LARS2Q15031 903 aaKnown RBP5.45□□□□□ -1.54
SDCBP-210ENST00000522843 SLC36A3Q495N2 470 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 LRRC23Q53EV4 343 aaPredicted RBP5.45□□□□□ -1.54
SDCBP-210ENST00000522843 C1orf140Q5VVS0 124 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 CARD17Q5XLA6 110 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 KDM4DQ6B0I6 523 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 FAHD1Q6P587 224 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 TBPL2Q6SJ96 375 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 SKA3Q8IX90 412 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 LYG1Q8N1E2 194 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 CBR4Q8N4T8 237 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 LINC00471Q8N535 108 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 SPICQ8N5J4 248 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 ZNF283Q8N7M2 679 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 ICA1LQ8NDH6 482 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 SLC30A7Q8NEW0 376 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 RAB40AQ8WXH6 277 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 B9D2Q9BPU9 175 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 EMC6Q9BV81 110 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 TAPBPLQ9BX59 468 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 SEMA6AQ9H2E6 1030 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 TMEM106BQ9NUM4 274 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 IL20RAQ9UHF4 553 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 FOXJ3Q9UPW0 622 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 WDR45Q9Y484 360 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 FRAS1Q86XX4 4008 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 KIAA1109Q2LD37 5005 aa5.45□□□□□ -1.54
SDCBP-210ENST00000522843 A0A0U1RQK1 487 aa5.44□□□□□ -1.54
SDCBP-210ENST00000522843 CENPVL3A0A0U1RRI6 287 aa5.44□□□□□ -1.54
SDCBP-210ENST00000522843 HTR3EA5X5Y0 456 aa5.44□□□□□ -1.54
SDCBP-210ENST00000522843 FFAR1O14842 300 aa5.44□□□□□ -1.54
SDCBP-210ENST00000522843 UBL3O95164 117 aa5.44□□□□□ -1.54
SDCBP-210ENST00000522843 ANXA2P07355 339 aaKnown RBP5.44□□□□□ -1.54
SDCBP-210ENST00000522843 SFTPBP07988 381 aa5.44□□□□□ -1.54
SDCBP-210ENST00000522843 CD55P08174 381 aa5.44□□□□□ -1.54
SDCBP-210ENST00000522843 GKN3PP0CG01 181 aa5.44□□□□□ -1.54
SDCBP-210ENST00000522843 ANXA8P13928 327 aa5.44□□□□□ -1.54
SDCBP-210ENST00000522843 MMP9P14780 707 aa5.44□□□□□ -1.54
SDCBP-210ENST00000522843 ZNF43P17038 809 aa5.44□□□□□ -1.54
SDCBP-210ENST00000522843 AQP1P29972 269 aa5.44□□□□□ -1.54
SDCBP-210ENST00000522843 AQP4P55087 323 aa5.44□□□□□ -1.54
SDCBP-210ENST00000522843 RPS7P62081 194 aaKnown RBP5.44□□□□□ -1.54
SDCBP-210ENST00000522843 BTG1P62324 171 aa5.44□□□□□ -1.54
SDCBP-210ENST00000522843 COX10Q12887 443 aa5.44□□□□□ -1.54
SDCBP-210ENST00000522843 PMS2P3Q13401 168 aa5.44□□□□□ -1.54
SDCBP-210ENST00000522843 DYRK1AQ13627 763 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms