RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 FAM3AP98173 230 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 C4orf26Q17RF5 130 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 C17orf58Q2M2W7 97 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 CNPY1Q3B7I2 92 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 TTLL9Q3SXZ7 439 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 TFDP3Q5H9I0 405 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 MRPL55Q7Z7F7 128 aaKnown RBP3.2□□□□□ -1.9
SKP1-209ENST00000522552 PPP1R27Q86WC6 154 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 CPNE9Q8IYJ1 553 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 PRSS58Q8IYP2 241 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 METTL13Q8N6R0 699 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 OR4K17Q8NGC6 315 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 OR10W1Q8NGF6 305 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 OR51G1Q8NGK1 321 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 PIFOQ8TCI5 191 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 DNAJC19Q96DA6 116 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 MRAP2Q96G30 205 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 ATXN7L3BQ96GX2 97 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 KIR2DL4Q99706 377 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 ULBP1Q9BZM6 244 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 OR51B5Q9H339 312 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 SPHK2Q9NRA0 654 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 FBXO6Q9NRD1 293 aaPredicted RBP3.2□□□□□ -1.9
SKP1-209ENST00000522552 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.2□□□□□ -1.9
SKP1-209ENST00000522552 DDIT4Q9NX09 232 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 VNN3Q9NY84 501 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 TAS2R13Q9NYV9 303 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 OR1A1Q9P1Q5 309 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 SPATA2Q9UM82 520 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 ABCC11Q96J66 1382 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 BRCA1P38398 1863 aaKnown RBP3.2□□□□□ -1.9
SKP1-209ENST00000522552 CEMIPQ8WUJ3 1361 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 A0A087WW49 117 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 A0A1W2PRG6 482 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 FOXI3A8MTJ6 420 aaPredicted RBP3.2□□□□□ -1.9
SKP1-209ENST00000522552 AZIN1O14977 448 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 TOMM40O96008 361 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 CD48P09326 243 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 GNAO1P09471 354 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 CBR1P16152 277 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 SERPINB5P36952 375 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 KIR2DS2P43631 304 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 DLX1P56177 255 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 RAB38P57729 211 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 SNRPD1P62314 119 aaKnown RBP3.2□□□□□ -1.9
SKP1-209ENST00000522552 SRPXP78539 464 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 FKBP3Q00688 224 aaKnown RBP3.2□□□□□ -1.9
SKP1-209ENST00000522552 SLC10A1Q14973 349 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 CEACAM21Q3KPI0 293 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 SMIM15Q7Z3B0 74 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 C10orf107Q8IVU9 208 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 RIMKLAQ8IXN7 391 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 Q8N1X5 172 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 C6orf223Q8N319 242 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 RFLNBQ8N5W9 214 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 ACBD4Q8NC06 268 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 OR4F15Q8NGB8 312 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 OR2A12Q8NGT7 310 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 FAM172AQ8WUF8 416 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 SLC35B4Q969S0 331 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 TMEM230Q96A57 120 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 CEP19Q96LK0 163 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 Q96MT0 163 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 NODALQ96S42 347 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 COA1Q9GZY4 146 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 C20orf85Q9H1P6 137 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 ARV1Q9H2C2 271 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 TMPRSS5Q9H3S3 457 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 UBIAD1Q9Y5Z9 338 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 CACNG2Q9Y698 323 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 TRIP12Q14669 1992 aaPredicted RBP3.19□□□□□ -1.9
SKP1-209ENST00000522552 GNG14A0A1W2PPG7 69 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 FUOMA2VDF0 154 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 EFCAB9A8MZ26 197 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 CDX4O14627 284 aaPredicted RBP3.19□□□□□ -1.9
SKP1-209ENST00000522552 RAD1O60671 282 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 CTNSO60931 367 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 ENTPD6O75354 484 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 CTDNEP1O95476 244 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 TTC4O95801 387 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 RENP00797 406 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 CRYAAP02489 173 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 CELA2AP08217 269 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 HIST1H1EP10412 219 aaKnown RBP3.19□□□□□ -1.9
SKP1-209ENST00000522552 THRAP10827 490 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 ZNF17P17021 662 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 VDAC1P21796 283 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 PRKACGP22612 351 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 IGHV1-2P23083 117 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 AK4P27144 223 aaPredicted RBP3.19□□□□□ -1.9
SKP1-209ENST00000522552 IFNGR2P38484 337 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 CD79BP40259 229 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 PMELP40967 661 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 PPICP45877 212 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 SLCO1A2P46721 670 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 NDUFV3P56181 108 aaKnown RBP3.19□□□□□ -1.9
SKP1-209ENST00000522552 RWDD2BP57060 319 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 SLC35A1P78382 337 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 ZNF146Q15072 292 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 ATP6AP1Q15904 470 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms