RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 SYCE1LA8MT33 242 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 MKRN2OSH3BPM6 223 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 H7C1H1 209 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 K7EN84 100 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 ZNF593O00488 134 aaPredicted RBP2.79□□□□□ -1.96
SQLE-204ENST00000520493 SNAI2O43623 268 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 CTNSO60931 367 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 NPIPB7O75200 414 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 UPK1BO75841 260 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 BRI3O95415 125 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 OR5AL1P0C617 328 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 GOLGA8HP0CJ92 632 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 PNMA6AP0CW24 399 aaPredicted RBP2.79□□□□□ -1.96
SQLE-204ENST00000520493 CD37P11049 281 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 ZNF30P17039 623 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 TCP1P17987 556 aaKnown RBP2.79□□□□□ -1.96
SQLE-204ENST00000520493 PGAM1P18669 254 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 RAB3AP20336 220 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 OMGP23515 440 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 MYCNOSP40205 109 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 RANBP1P43487 201 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 ZNF138P52744 262 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 WNT4P56705 351 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 MLF1P58340 268 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 SLC7A9P82251 487 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 REG3AQ06141 175 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 IFFO1Q0D2I5 559 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 DYNC1I2Q13409 638 aaKnown RBP2.79□□□□□ -1.96
SQLE-204ENST00000520493 ZBTB6Q15916 424 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 C5orf47Q569G3 176 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 ACTL10Q5JWF8 245 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 ZNF544Q6NX49 715 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 IL34Q6ZMJ4 242 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 CYP4Z1Q86W10 505 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 KRTAP11-1Q8IUC1 163 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 FAM71E2Q8N5Q1 922 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 C20orf203Q8NBC4 194 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 C11orf72Q8NBR9 251 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 OR10AD1Q8NGE0 317 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 OR6X1Q8NH79 312 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 ZFAND1Q8TCF1 268 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 ACTRT1Q8TDG2 376 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 DDI1Q8WTU0 396 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 RGP1Q92546 391 aaPredicted RBP2.79□□□□□ -1.96
SQLE-204ENST00000520493 DCUN1D4Q92564 292 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 IL22RA2Q969J5 263 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 NTAN1Q96AB6 310 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 PHYHIPLQ96FC7 376 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 TEAD3Q99594 435 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 COPS4Q9BT78 406 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 OR51B5Q9H339 312 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 WDR55Q9H6Y2 383 aaPredicted RBP2.79□□□□□ -1.96
SQLE-204ENST00000520493 C6orf50Q9HD87 102 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 RGS18Q9NS28 235 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 SLC25A37Q9NYZ2 338 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 PCYOX1Q9UHG3 505 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 ZNF257Q9Y2Q1 563 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 KLF12Q9Y4X4 402 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 HEBP2Q9Y5Z4 205 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 URGCP-MRPS24S4R325 110 aa2.79□□□□□ -1.96
SQLE-204ENST00000520493 BRCA1P38398 1863 aaKnown RBP2.78□□□□□ -1.96
SQLE-204ENST00000520493 NFASCO94856 1347 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 IGHV2OR16-5A0A0B4J2B6 119 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 GJE1A6NN92 205 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 CLDN34H7C241 214 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 H7C417 338 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 hCG_2039718K7EN88 272 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 B4GALT5O43286 388 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 NIPSNAP2O75323 286 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 TNFSF13O75888 250 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 TTC4O95801 387 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 MOSP00540 346 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 PTHP01270 115 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 THRAP10827 490 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 FUT3P21217 361 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 HTR1DP28221 377 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 CEACAM6P40199 344 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 CDKN2BP42772 138 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 RGS6P49758 472 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 P2RX1P51575 399 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 RPS23P62266 143 aaKnown RBP2.78□□□□□ -1.96
SQLE-204ENST00000520493 SKP1P63208 163 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 SMARCB1Q12824 385 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 MAPRE2Q15555 327 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 POU2AF1Q16633 256 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 FAM27D1Q5T7N8 215 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 ACP7Q6ZNF0 438 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 TGIF2LYQ8IUE0 185 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 SUMF2Q8NBJ7 301 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 OR2L8Q8NGY9 312 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 DOK4Q8TEW6 326 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 DCPSQ96C86 337 aaKnown RBP2.78□□□□□ -1.96
SQLE-204ENST00000520493 DNAJC19Q96DA6 116 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 LINC00167Q96N53 147 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 NRTNQ99748 197 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 SLC25A2Q9BXI2 301 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 PLEKHA1Q9HB21 404 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 SLCO1B3Q9NPD5 702 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 ISYNA1Q9NPH2 558 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 UVRAGQ9P2Y5 699 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms