RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 SAR1BQ9Y6B6 198 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 IGHV3-49A0A0A0MS15 119 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 IGHV7-4-1A0A0J9YVY3 117 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 KBTBD11-OT1A0A1B0GTJ5 212 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 TSPAN11A1L157 253 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 M0R3G1 203 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 NME4O00746 187 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 NMT2O60551 498 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 DNAJB6O75190 326 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 GLSO94925 669 aaPredicted RBP1.65□□□□□ -2.15
SKP1-207ENST00000520417 CYB5R3P00387 301 aaPredicted RBP1.65□□□□□ -2.15
SKP1-207ENST00000520417 IGLV3-25P01717 112 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 HSPD1P10809 573 aaKnown RBP1.65□□□□□ -2.15
SKP1-207ENST00000520417 TCP1P17987 556 aaKnown RBP1.65□□□□□ -2.15
SKP1-207ENST00000520417 RAB4AP20338 218 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 MYL9P24844 172 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 LOXP28300 417 aaPredicted RBP1.65□□□□□ -2.15
SKP1-207ENST00000520417 RFC3P40938 356 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 SLC1A2P43004 574 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 PRLHRP49683 370 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 NDUFA8P51970 172 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 ZNF121P58317 390 aaPredicted RBP1.65□□□□□ -2.15
SKP1-207ENST00000520417 RBX1P62877 108 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 DMC1Q14565 340 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 TRMT5Q32P41 509 aaKnown RBP1.65□□□□□ -2.15
SKP1-207ENST00000520417 TEX30Q5JUR7 227 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 H3F3CQ6NXT2 135 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 TMEM53Q6P2H8 277 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 RTL4Q6ZR62 310 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 MDP1Q86V88 176 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 ZNF680Q8NEM1 530 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 OR5M1Q8NGP8 315 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 PHOSPHO2Q8TCD6 241 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 RERGQ96A58 199 aaPredicted RBP1.65□□□□□ -2.15
SKP1-207ENST00000520417 DYNLL2Q96FJ2 89 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 BTN2A3PQ96KV6 586 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 TMEM243Q9BU79 118 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 FRMD8P1Q9BZ68 369 aaPredicted RBP1.65□□□□□ -2.15
SKP1-207ENST00000520417 PIGUQ9H490 435 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 RGS18Q9NS28 235 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 CLN6Q9NWW5 311 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 CLN8Q9UBY8 286 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 HES2Q9Y543 173 aa1.65□□□□□ -2.15
SKP1-207ENST00000520417 BTNL10A8MVZ5 291 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 WRBO00258 174 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 DNALI1O14645 258 aaPredicted RBP1.64□□□□□ -2.15
SKP1-207ENST00000520417 PLIN3O60664 434 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 SERPINB7O75635 380 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 GATBO75879 557 aaKnown RBP1.64□□□□□ -2.15
SKP1-207ENST00000520417 CD160O95971 181 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 IGLV6-57P01721 117 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 PGA5P0DJD9 388 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 USF1P22415 310 aaPredicted RBP1.64□□□□□ -2.15
SKP1-207ENST00000520417 HTR1DP28221 377 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 PFN2P35080 140 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 PSMD8P48556 350 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 UBE2MP61081 183 aaKnown RBP1.64□□□□□ -2.15
SKP1-207ENST00000520417 SIGLEC14Q08ET2 396 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 PNOCQ13519 176 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 ZNF829Q3KNS6 432 aaPredicted RBP1.64□□□□□ -2.15
SKP1-207ENST00000520417 LINC00336Q6ZUF6 198 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 VKORC1L1Q8N0U8 176 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 ZNF664Q8N3J9 261 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 ZNF645Q8N7E2 425 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 ST20-AS1Q8NBB2 130 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 OR5T1Q8NG75 326 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 TSEN15Q8WW01 171 aaKnown RBP1.64□□□□□ -2.15
SKP1-207ENST00000520417 C17orf50Q8WW18 174 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 GHSRQ92847 366 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 SGTBQ96EQ0 304 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 BPIFA3Q9BQP9 254 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 CALN1Q9BXU9 219 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 VPS37BQ9H9H4 285 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 RRAGDQ9NQL2 400 aaPredicted RBP1.64□□□□□ -2.15
SKP1-207ENST00000520417 PDP1Q9P0J1 537 aaPredicted RBP1.64□□□□□ -2.15
SKP1-207ENST00000520417 RCL1Q9Y2P8 373 aaKnown RBP1.64□□□□□ -2.15
SKP1-207ENST00000520417 FHOD3Q2V2M9 1422 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 PCDH11XQ9BZA7 1347 aa1.64□□□□□ -2.15
SKP1-207ENST00000520417 ZNF407Q9C0G0 2248 aa1.63□□□□□ -2.15
SKP1-207ENST00000520417 IGHV3OR16-9A0A0B4J2B5 98 aa1.63□□□□□ -2.15
SKP1-207ENST00000520417 TMEM120BA0PK00 339 aa1.63□□□□□ -2.15
SKP1-207ENST00000520417 TNFRSF11BO00300 401 aa1.63□□□□□ -2.15
SKP1-207ENST00000520417 CACNG3O60359 315 aa1.63□□□□□ -2.15
SKP1-207ENST00000520417 FCN3O75636 299 aa1.63□□□□□ -2.15
SKP1-207ENST00000520417 TGM6O95932 706 aa1.63□□□□□ -2.15
SKP1-207ENST00000520417 HLA-HP01893 362 aa1.63□□□□□ -2.15
SKP1-207ENST00000520417 IFNW1P05000 195 aa1.63□□□□□ -2.15
SKP1-207ENST00000520417 KRT16P08779 473 aa1.63□□□□□ -2.15
SKP1-207ENST00000520417 CTRB1P17538 263 aa1.63□□□□□ -2.15
SKP1-207ENST00000520417 GSTM3P21266 225 aa1.63□□□□□ -2.15
SKP1-207ENST00000520417 RAB9AP51151 201 aa1.63□□□□□ -2.15
SKP1-207ENST00000520417 IFITM3Q01628 133 aa1.63□□□□□ -2.15
SKP1-207ENST00000520417 FUT5Q11128 374 aa1.63□□□□□ -2.15
SKP1-207ENST00000520417 ILKQ13418 452 aa1.63□□□□□ -2.15
SKP1-207ENST00000520417 KRTAP13-4Q3LI77 160 aa1.63□□□□□ -2.15
SKP1-207ENST00000520417 GCSAMLQ5JQS6 135 aa1.63□□□□□ -2.15
SKP1-207ENST00000520417 GUSBP11Q6P575 273 aa1.63□□□□□ -2.15
SKP1-207ENST00000520417 TMEM220Q6QAJ8 160 aa1.63□□□□□ -2.15
SKP1-207ENST00000520417 ERO1BQ86YB8 467 aa1.63□□□□□ -2.15
SKP1-207ENST00000520417 OFCC1Q8IZS5 231 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms