RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 SLAQ13239 276 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 OR2T5Q6IEZ7 315 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 TMEM205Q6UW68 189 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 RTL4Q6ZR62 310 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 PID1Q7Z2X4 250 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 CALHM1Q8IU99 346 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 CDKL3Q8IVW4 592 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 ST13P4Q8IZP2 240 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 OR2T29Q8NH02 315 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 COQ8AQ8NI60 647 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 PDXPQ96GD0 296 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 RNF170Q96K19 258 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 UBE2E2Q96LR5 201 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 MAP1LC3CQ9BXW4 147 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 C12orf10Q9HB07 376 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 ZNRD1Q9P1U0 126 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 RAB26Q9ULW5 256 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 UBIAD1Q9Y5Z9 338 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 TMEM14AQ9Y6G1 99 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 TDRD6O60522 2096 aaKnown RBP3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 TRAV19A0A0A6YYK7 116 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 IGKV6D-41A0A0C4DH26 115 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 LOC100506127A0A0U1RQW1 187 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 DFFAO00273 331 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 TNFRSF11BO00300 401 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 RFXANKO14593 260 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 SOCS1O15524 211 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 ENTPD5O75356 428 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 REM1O75628 298 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 UPK1BO75841 260 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 TRAPPC6AO75865 159 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 PTHP01270 115 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 APOA1P02647 267 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 THRAP10827 490 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 IGFBP3P17936 291 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 PSMC3P17980 439 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 CCNOP22674 350 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 CASQ1P31415 396 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 NDUFA8P51970 172 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 TAS2R46P59540 309 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 RPL23P62829 140 aaKnown RBP3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 CACNG7P62955 275 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 Q3ZCU0 254 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 FAM78AQ5JUQ0 283 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 CPTPQ5TA50 214 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 CD300LGQ6UXG3 332 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 NTM-AS1Q6ZSK4 140 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 SAXO1Q8IYX7 474 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 GPR26Q8NDV2 337 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 CENPNQ96H22 339 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 GLT1D1Q96MS3 346 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 OSBPL11Q9BXB4 747 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 ZDHHC4Q9NPG8 344 aa3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 ZNF223Q9UK11 482 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P46-201ENST00000520062 ZNFX1Q9P2E3 1918 aaKnown RBP3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 SMIM26A0A096LP01 95 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 BPY2O14599 106 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 PRMT5O14744 637 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 GATCO43716 136 aaKnown RBP3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 TTC4O95801 387 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 MAGP20916 626 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 BGNP21810 368 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 CD70P32970 193 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 PCK1P35558 622 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 HCCSP53701 268 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 PAFAH1B2P68402 229 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 CRADDP78560 199 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 ST3GAL4Q11206 333 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 OR1Q1Q15612 314 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 STK11Q15831 433 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 Q6P435 159 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 SLC30A8Q8IWU4 369 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 ENTHD1Q8IYW4 607 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 SYS1Q8N2H4 156 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 NDNFQ8TB73 568 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 LRRC20Q8TCA0 184 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 TMEM234Q8WY98 164 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 FAM19A4Q96LR4 140 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 FOPNLQ96NB1 174 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 RDH12Q96NR8 316 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 ZNF382Q96SR6 550 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 TSNAXQ99598 290 aaKnown RBP3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 NDFIP1Q9BT67 221 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 OR51B5Q9H339 312 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 ZNF442Q9H7R0 627 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 AGPAT3Q9NRZ7 376 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 ZNF222Q9UK12 451 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 HES2Q9Y543 173 aa3.36□□□□□ -1.87
HMGB1P46-201ENST00000520062 COL16A1Q07092 1604 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 TMEM223A0PJW6 202 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 KRBOX1C9JBD0 128 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 LINC01619G3V211 115 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 H7C2Y5 167 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 B4GALT5O43286 388 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 SNAI2O43623 268 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 RHOCP08134 193 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 HTR2CP28335 458 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 GGT2P36268 569 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 CDK5Q00535 292 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 PPIDQ08752 370 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms