RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 C1orf123Q9NWV4 160 aa10.51□□□□□ -0.73
SYNPO-204ENST00000519664 DUSP13Q9UII6 198 aa10.51□□□□□ -0.73
SYNPO-204ENST00000519664 PATE4P0C8F1 98 aa10.51□□□□□ -0.73
SYNPO-204ENST00000519664 CT45A8P0DMV1 189 aa10.51□□□□□ -0.73
SYNPO-204ENST00000519664 CT45A9P0DMV2 189 aa10.51□□□□□ -0.73
SYNPO-204ENST00000519664 CT45A2Q5DJT8 189 aa10.51□□□□□ -0.73
SYNPO-204ENST00000519664 DOK3Q7L591 496 aa10.51□□□□□ -0.73
SYNPO-204ENST00000519664 TSEN54Q7Z6J9 526 aaKnown RBP10.51□□□□□ -0.73
SYNPO-204ENST00000519664 TMEM200AQ86VY9 491 aa10.51□□□□□ -0.73
SYNPO-204ENST00000519664 SLC25A43Q8WUT9 341 aaPredicted RBP10.51□□□□□ -0.73
SYNPO-204ENST00000519664 NANOS1Q8WY41 292 aaKnown RBP10.51□□□□□ -0.73
SYNPO-204ENST00000519664 SMOC1Q9H4F8 434 aa10.51□□□□□ -0.73
SYNPO-204ENST00000519664 IGHV1OR15-9A0A0B4J2B8 117 aa10.51□□□□□ -0.73
SYNPO-204ENST00000519664 C4orf47A7E2U8 309 aa10.51□□□□□ -0.73
SYNPO-204ENST00000519664 TMEM71Q6P5X7 295 aa10.51□□□□□ -0.73
SYNPO-204ENST00000519664 BRICD5Q6PL45 260 aa10.51□□□□□ -0.73
SYNPO-204ENST00000519664 DPPA2Q7Z7J5 298 aa10.51□□□□□ -0.73
SYNPO-204ENST00000519664 SPEM1Q8N4L4 309 aa10.51□□□□□ -0.73
SYNPO-204ENST00000519664 OR14K1Q8NGZ2 314 aa10.51□□□□□ -0.73
SYNPO-204ENST00000519664 OR51F2Q8NH61 342 aa10.51□□□□□ -0.73
SYNPO-204ENST00000519664 TGIF2Q9GZN2 237 aa10.51□□□□□ -0.73
SYNPO-204ENST00000519664 MEX3AA1L020 520 aaKnown RBP10.5□□□□□ -0.73
SYNPO-204ENST00000519664 TNFSF11O14788 317 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 TO15178 435 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 SLC6A1P30531 599 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 IL10RAQ13651 578 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 Q3ZCU0 254 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 AADACL3Q5VUY0 350 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 LRRTM1Q86UE6 522 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 GVQW1Q8N7I0 195 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 FAM234AQ9H0X4 552 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 SLC25A32Q9H2D1 315 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 UNKLQ9H9P5 680 aaKnown RBP10.5□□□□□ -0.73
SYNPO-204ENST00000519664 GCH1P30793 250 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 GRB2P62993 217 aaKnown RBP10.5□□□□□ -0.73
SYNPO-204ENST00000519664 COL19A1Q14993 1142 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 SHEQ5VZ18 495 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 C20orf196Q8IYI0 205 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 LINC00518Q8N0U6 118 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 OR51A2Q8NGJ7 313 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 CYB5R1Q9UHQ9 305 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 ZNF230Q9UIE0 474 aaPredicted RBP10.5□□□□□ -0.73
SYNPO-204ENST00000519664 TIMM8BQ9Y5J9 83 aaPredicted RBP10.5□□□□□ -0.73
SYNPO-204ENST00000519664 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.5□□□□□ -0.73
SYNPO-204ENST00000519664 GRPP07492 148 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 GABRA2P47869 451 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 ARF1P84077 181 aaKnown RBP10.5□□□□□ -0.73
SYNPO-204ENST00000519664 HLA-BQ31612 363 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 TMEM88Q6PEY1 159 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 ZNF687Q8N1G0 1237 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 MUC20Q8N307 709 aaPredicted RBP10.5□□□□□ -0.73
SYNPO-204ENST00000519664 KCNRGQ8N5I3 272 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 FRRS1LQ9P0K9 344 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 FOXJ3Q9UPW0 622 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 UTRNP46939 3433 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 TRAV8-7A0A075B6U6 113 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 SPRY1O43609 319 aaPredicted RBP10.5□□□□□ -0.73
SYNPO-204ENST00000519664 GLSO94925 669 aaPredicted RBP10.5□□□□□ -0.73
SYNPO-204ENST00000519664 IGKV1D-16P01601 117 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 TMIGD3P0DMS9 266 aaPredicted RBP10.5□□□□□ -0.73
SYNPO-204ENST00000519664 RBP2P50120 134 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 PRSS35Q8N3Z0 413 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 RNF141Q8WVD5 230 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 DEFB127Q9H1M4 99 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 ZFP57Q9NU63 452 aa10.5□□□□□ -0.73
SYNPO-204ENST00000519664 ZNF629Q9UEG4 869 aaPredicted RBP10.5□□□□□ -0.73
SYNPO-204ENST00000519664 IGHA1P01876 353 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 PSMB6P28072 239 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 GSG1Q2KHT4 349 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 RABEPKQ7Z6M1 372 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 TERB2Q8NHR7 220 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 UBALD1Q8TB05 177 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 SPACA9Q96E40 222 aaPredicted RBP10.49□□□□□ -0.73
SYNPO-204ENST00000519664 NMNAT2Q9BZQ4 307 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 LUZP4Q9P127 313 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 DHHO43323 396 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 FOXS1O43638 330 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 MGMTP16455 207 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 CCL11P51671 97 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 MRPS34P82930 218 aaKnown RBP10.49□□□□□ -0.73
SYNPO-204ENST00000519664 SNTB1Q13884 538 aaKnown RBP10.49□□□□□ -0.73
SYNPO-204ENST00000519664 ZNF141Q15928 474 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 SP6Q3SY56 376 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 ACTBL2Q562R1 376 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 FAM219AQ8IW50 185 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 LINC00469Q8N7U9 141 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 OR2AE1Q8NHA4 323 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 PRSS27Q9BQR3 290 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 CNTNAP3Q9BZ76 1288 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 RPS10-NUDT3A0A1W2PQS6 291 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 XRCC2O43543 280 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 HOXB9P17482 250 aaPredicted RBP10.49□□□□□ -0.73
SYNPO-204ENST00000519664 EIF2S3P41091 472 aaKnown RBP10.49□□□□□ -0.73
SYNPO-204ENST00000519664 RPS10P46783 165 aaKnown RBP10.49□□□□□ -0.73
SYNPO-204ENST00000519664 SFRP5Q5T4F7 317 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 PWWP2BQ6NUJ5 590 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 SGK3Q96BR1 496 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 OXGR1Q96P68 337 aa10.49□□□□□ -0.73
SYNPO-204ENST00000519664 ALG1L2C9J202 215 aa10.48□□□□□ -0.73
SYNPO-204ENST00000519664 SEMG1P04279 462 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms