RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 GRK5P34947 590 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 DDOSTP39656 456 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 PITPNBP48739 271 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 PAX8Q06710 450 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 PCK2Q16822 640 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 TIGD6Q17RP2 521 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 FAM201AQ5SY85 155 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 PRAMEF6Q5VXH4 476 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 DCDC5Q6ZRR9 648 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 SHFQ7M4L6 423 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 ERI1Q8IV48 349 aaKnown RBP11.44□□□□□ -0.58
TCOF1-215ENST00000515516 C3orf56Q8N813 242 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 BOLLQ8N9W6 283 aaKnown RBP11.44□□□□□ -0.58
TCOF1-215ENST00000515516 OR6N2Q8NGY6 317 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 RAB40AQ8WXH6 277 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 CLPTM1LQ96KA5 538 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 TEX12Q9BXU0 123 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 YY1AP1Q9H869 796 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 TRIM36Q9NQ86 728 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 C14orf119Q9NWQ9 140 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 CLN8Q9UBY8 286 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 IGHV2-70DA0A0C4DH43 119 aa11.43□□□□□ -0.58
TCOF1-215ENST00000515516 DHRS12A0PJE2 317 aa11.43□□□□□ -0.58
TCOF1-215ENST00000515516 ARRDC5A6NEK1 342 aa11.43□□□□□ -0.58
TCOF1-215ENST00000515516 A6NLC8 198 aa11.43□□□□□ -0.58
TCOF1-215ENST00000515516 AQP12BA6NM10 295 aa11.43□□□□□ -0.58
TCOF1-215ENST00000515516 GYG2O15488 501 aa11.43□□□□□ -0.58
TCOF1-215ENST00000515516 GRPP07492 148 aa11.43□□□□□ -0.58
TCOF1-215ENST00000515516 CFL1P23528 166 aaKnown RBP11.43□□□□□ -0.58
TCOF1-215ENST00000515516 MTNR1AP48039 350 aa11.43□□□□□ -0.58
TCOF1-215ENST00000515516 CX3CR1P49238 355 aa11.43□□□□□ -0.58
TCOF1-215ENST00000515516 OR8B8Q15620 311 aa11.43□□□□□ -0.58
TCOF1-215ENST00000515516 MPPED2Q15777 294 aa11.43□□□□□ -0.58
TCOF1-215ENST00000515516 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-215ENST00000515516 AQP12AQ8IXF9 295 aa11.43□□□□□ -0.58
TCOF1-215ENST00000515516 IQCF1Q8N6M8 205 aa11.43□□□□□ -0.58
TCOF1-215ENST00000515516 SIGLECL1Q8N7X8 197 aa11.43□□□□□ -0.58
TCOF1-215ENST00000515516 OR8S1Q8NH09 359 aa11.43□□□□□ -0.58
TCOF1-215ENST00000515516 DVL3Q92997 716 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-215ENST00000515516 OR51V1Q9H2C8 321 aa11.43□□□□□ -0.58
TCOF1-215ENST00000515516 MMADHCQ9H3L0 296 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-215ENST00000515516 PDP1Q9P0J1 537 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-215ENST00000515516 ERVK-18Q9QC07 812 aa11.43□□□□□ -0.58
TCOF1-215ENST00000515516 ZNF69Q9UC07 566 aa11.43□□□□□ -0.58
TCOF1-215ENST00000515516 TRAV38-1A0A0B4J264 116 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 KIR2DS1A0A191URI9 304 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 hCG_1807616A0A1W2PRN6 198 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 TMEM89A2RUT3 159 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 FAM183AA6NL82 134 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 PRR23D1E9PI22 279 aaPredicted RBP11.42□□□□□ -0.58
TCOF1-215ENST00000515516 LGALS8O00214 317 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 DYNC1I1O14576 645 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 ACOT8O14734 319 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 PHYHO14832 338 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 GLCEO94923 617 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 HMGN1P05114 100 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 H2BFMP0C1H6 154 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 PRR23D2P0DMB1 279 aaPredicted RBP11.42□□□□□ -0.58
TCOF1-215ENST00000515516 PPIAL4GP0DN37 164 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 PSKH1P11801 424 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 CFPP27918 469 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 CD80P33681 288 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 COMPP49747 757 aaPredicted RBP11.42□□□□□ -0.58
TCOF1-215ENST00000515516 NPY4RP50391 375 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 UBA52P62987 128 aaKnown RBP11.42□□□□□ -0.58
TCOF1-215ENST00000515516 BAMBIQ13145 260 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 GINS1Q14691 196 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 DNAL1Q4LDG9 190 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 CD276Q5ZPR3 534 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 SFRP4Q6FHJ7 346 aaPredicted RBP11.42□□□□□ -0.58
TCOF1-215ENST00000515516 DPY19L4Q7Z388 723 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 SPATA24Q86W54 205 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 ADGRG5Q8IZF4 528 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 ZDHHC22Q8N966 263 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 C19orf18Q8NEA5 215 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 OR56B2PQ8NGI1 322 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 OR52H1Q8NGJ2 320 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 CANT1Q8WVQ1 401 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 TECTBQ96PL2 329 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 NUDT16L1Q9BRJ7 211 aaKnown RBP11.42□□□□□ -0.58
TCOF1-215ENST00000515516 OR10A2Q9H208 303 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 MED20Q9H944 212 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 ZMAT3Q9HA38 289 aaKnown RBP11.42□□□□□ -0.58
TCOF1-215ENST00000515516 C1orf123Q9NWV4 160 aa11.42□□□□□ -0.58
TCOF1-215ENST00000515516 C3orf80F5H4A9 247 aa11.41□□□□□ -0.58
TCOF1-215ENST00000515516 NDUFA2O43678 99 aa11.41□□□□□ -0.58
TCOF1-215ENST00000515516 ENSAO43768 121 aaKnown RBP11.41□□□□□ -0.58
TCOF1-215ENST00000515516 OSMP13725 252 aa11.41□□□□□ -0.58
TCOF1-215ENST00000515516 GNALP38405 381 aa11.41□□□□□ -0.58
TCOF1-215ENST00000515516 SNCBQ16143 134 aa11.41□□□□□ -0.58
TCOF1-215ENST00000515516 KLF17Q5JT82 389 aaPredicted RBP11.41□□□□□ -0.58
TCOF1-215ENST00000515516 LINC01590Q5TEZ4 76 aa11.41□□□□□ -0.58
TCOF1-215ENST00000515516 WDR25Q64LD2 544 aaPredicted RBP11.41□□□□□ -0.58
TCOF1-215ENST00000515516 LYPD2Q6UXB3 125 aa11.41□□□□□ -0.58
TCOF1-215ENST00000515516 FAM57BQ71RH2 274 aa11.41□□□□□ -0.58
TCOF1-215ENST00000515516 DOK3Q7L591 496 aa11.41□□□□□ -0.58
TCOF1-215ENST00000515516 TRPM8Q7Z2W7 1104 aa11.41□□□□□ -0.58
TCOF1-215ENST00000515516 PARP8Q8N3A8 854 aa11.41□□□□□ -0.58
TCOF1-215ENST00000515516 FTMTQ8N4E7 242 aa11.41□□□□□ -0.58
TCOF1-215ENST00000515516 RNF133Q8WVZ7 376 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms