RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 CYB5R1Q9UHQ9 305 aa12.95□□□□□ -0.34
LMNA-223ENST00000515459 A0A1W2PRQ8 180 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 ANKRD61A6NGH8 418 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 UNC119BA6NIH7 251 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 M0R135 149 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 CXCR6O00574 342 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 RENP00797 406 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 PRB2P02812 416 aaPredicted RBP12.94□□□□□ -0.34
LMNA-223ENST00000515459 H1F0P07305 194 aaKnown RBP12.94□□□□□ -0.34
LMNA-223ENST00000515459 ZNF92Q03936 586 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 MZT1Q08AG7 82 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 DGCR6Q14129 220 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 HERPUD1Q15011 391 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 FAM189A2Q15884 450 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 SNAI3Q3KNW1 292 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 FGD3Q5JSP0 725 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 SMARCD3Q6STE5 483 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 CMTM4Q8IZR5 234 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 LY6G5BQ8NDX9 201 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 OR5R1Q8NH85 324 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 SPTSSAQ969W0 71 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 ZNF799Q96GE5 643 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 KRCC1Q9NPI7 259 aaPredicted RBP12.94□□□□□ -0.34
LMNA-223ENST00000515459 RPRD1BQ9NQG5 326 aaKnown RBP12.94□□□□□ -0.34
LMNA-223ENST00000515459 SIRT7Q9NRC8 400 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 C14orf119Q9NWQ9 140 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 AP3M1Q9Y2T2 418 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 ENPP4Q9Y6X5 453 aa12.94□□□□□ -0.34
LMNA-223ENST00000515459 IGHV3OR15-7A0A075B7D8 119 aa12.93□□□□□ -0.34
LMNA-223ENST00000515459 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.93□□□□□ -0.34
LMNA-223ENST00000515459 BHLHE40O14503 412 aa12.93□□□□□ -0.34
LMNA-223ENST00000515459 NPFFO15130 113 aa12.93□□□□□ -0.34
LMNA-223ENST00000515459 GSTA4O15217 222 aa12.93□□□□□ -0.34
LMNA-223ENST00000515459 PAHP00439 452 aa12.93□□□□□ -0.34
LMNA-223ENST00000515459 SERPINA1P01009 418 aa12.93□□□□□ -0.34
LMNA-223ENST00000515459 HLA-DQA2P01906 255 aa12.93□□□□□ -0.34
LMNA-223ENST00000515459 GABRA5P31644 462 aa12.93□□□□□ -0.34
LMNA-223ENST00000515459 DBPQ10586 325 aaPredicted RBP12.93□□□□□ -0.34
LMNA-223ENST00000515459 RFX4Q33E94 735 aa12.93□□□□□ -0.34
LMNA-223ENST00000515459 ZBTB46Q86UZ6 589 aa12.93□□□□□ -0.34
LMNA-223ENST00000515459 FGFRL1Q8N441 504 aa12.93□□□□□ -0.34
LMNA-223ENST00000515459 OR2AE1Q8NHA4 323 aa12.93□□□□□ -0.34
LMNA-223ENST00000515459 MAP6Q96JE9 813 aa12.93□□□□□ -0.34
LMNA-223ENST00000515459 PPA2Q9H2U2 334 aa12.93□□□□□ -0.34
LMNA-223ENST00000515459 CMTM6Q9NX76 183 aa12.93□□□□□ -0.34
LMNA-223ENST00000515459 GMPR2Q9P2T1 348 aaKnown RBP12.93□□□□□ -0.34
LMNA-223ENST00000515459 RNASEK-C17orf49H0YIS7 233 aa12.92□□□□□ -0.34
LMNA-223ENST00000515459 GPR37O15354 613 aa12.92□□□□□ -0.34
LMNA-223ENST00000515459 TROVE2P10155 538 aaKnown RBP eCLIP12.92□□□□□ -0.34
LMNA-223ENST00000515459 MUC1P15941 1255 aaPredicted RBP12.92□□□□□ -0.34
LMNA-223ENST00000515459 GRK5P34947 590 aa12.92□□□□□ -0.34
LMNA-223ENST00000515459 LIPEQ05469 1076 aa12.92□□□□□ -0.34
LMNA-223ENST00000515459 MICBQ29980 383 aa12.92□□□□□ -0.34
LMNA-223ENST00000515459 GLYATL3Q5SZD4 288 aa12.92□□□□□ -0.34
LMNA-223ENST00000515459 SLC36A1Q7Z2H8 476 aa12.92□□□□□ -0.34
LMNA-223ENST00000515459 ARPINQ7Z6K5 226 aa12.92□□□□□ -0.34
LMNA-223ENST00000515459 SLC15A3Q8IY34 581 aa12.92□□□□□ -0.34
LMNA-223ENST00000515459 OR4K13Q8NH42 304 aa12.92□□□□□ -0.34
LMNA-223ENST00000515459 CCL13Q99616 98 aa12.92□□□□□ -0.34
LMNA-223ENST00000515459 SAR1AQ9NR31 198 aa12.92□□□□□ -0.34
LMNA-223ENST00000515459 DNAJB11Q9UBS4 358 aa12.92□□□□□ -0.34
LMNA-223ENST00000515459 FAM32AQ9Y421 112 aaKnown RBP12.92□□□□□ -0.34
LMNA-223ENST00000515459 TRBV4-1A0A0J9YWV2 114 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 A0A1B0GW55 424 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 A0A1W2PRD5 423 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 A0A1W2PRF3 423 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 A0A1W2PRM7 423 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 ARPC3O15145 178 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 DUX4L2P0CJ85 424 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 DUX4L3P0CJ86 424 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 DUX4L4P0CJ87 422 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 DUX4L5P0CJ88 424 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 DUX4L6P0CJ89 424 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 DUX4L7P0CJ90 424 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 HIST1H1CP16403 213 aaKnown RBP12.91□□□□□ -0.34
LMNA-223ENST00000515459 NOS3P29474 1203 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 SLC6A6P31641 620 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 PRB3Q04118 309 aaPredicted RBP12.91□□□□□ -0.34
LMNA-223ENST00000515459 SEC23BQ15437 767 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 PCK2Q16822 640 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 WDR38Q5JTN6 314 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 C11orf88Q6PI97 169 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 DUX4L9Q6RFH8 374 aaPredicted RBP12.91□□□□□ -0.34
LMNA-223ENST00000515459 DRAM2Q6UX65 266 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 LNX2Q8N448 690 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 OR56B2PQ8NGI1 322 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 OR8S1Q8NH09 359 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 FANK1Q8TC84 345 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 LRRC29Q8WV35 223 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 PPP1R14AQ96A00 147 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 NSRP1Q9H0G5 558 aaKnown RBP12.91□□□□□ -0.34
LMNA-223ENST00000515459 OR52D1Q9H346 318 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 RNPEPL1Q9HAU8 725 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 MRPL22Q9NWU5 206 aaKnown RBP12.91□□□□□ -0.34
LMNA-223ENST00000515459 DUX4Q9UBX2 424 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 KCNG2Q9UJ96 466 aa12.91□□□□□ -0.34
LMNA-223ENST00000515459 MEIOCA2RUB1 952 aa12.9□□□□□ -0.34
LMNA-223ENST00000515459 HMGB1P1B2RPK0 211 aaPredicted RBP12.9□□□□□ -0.34
LMNA-223ENST00000515459 NDUFB3O43676 98 aa12.9□□□□□ -0.34
LMNA-223ENST00000515459 ZNF823P16415 610 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms