RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 HBE1P02100 147 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 UBCP0CG48 685 aaKnown RBP1.03□□□□□ -2.24
NEDD4-211ENST00000514893 CD28P10747 220 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 USF1P22415 310 aaPredicted RBP1.03□□□□□ -2.24
NEDD4-211ENST00000514893 PRKACBP22694 351 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 POLR2IP36954 125 aaKnown RBP1.03□□□□□ -2.24
NEDD4-211ENST00000514893 MRPL19P49406 292 aaKnown RBP1.03□□□□□ -2.24
NEDD4-211ENST00000514893 PRLHRP49683 370 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 SYNJ2BPP57105 145 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 RPS15AP62244 130 aaKnown RBP1.03□□□□□ -2.24
NEDD4-211ENST00000514893 RBX1P62877 108 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 FUT5Q11128 374 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 GABRA6Q16445 453 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 ZNF829Q3KNS6 432 aaPredicted RBP1.03□□□□□ -2.24
NEDD4-211ENST00000514893 SLC25A35Q3KQZ1 300 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 UBE2UQ5VVX9 321 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 OPN5Q6U736 354 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 SPESP1Q6UW49 350 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 ANGPTL8Q6UXH0 198 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 BZW1Q7L1Q6 419 aaKnown RBP1.03□□□□□ -2.24
NEDD4-211ENST00000514893 SSX9Q7RTT3 188 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 HORMAD1Q86X24 394 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 C11orf72Q8NBR9 251 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 BBOF1Q8ND07 529 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 OR52E5Q8NH55 327 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 RXFP4Q8TDU9 374 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 CDS1Q92903 461 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 CPNE4Q96A23 557 aaPredicted RBP1.03□□□□□ -2.24
NEDD4-211ENST00000514893 APH1AQ96BI3 265 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 WDR34Q96EX3 536 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 SCGB3A2Q96PL1 93 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 XPO6Q96QU8 1125 aaKnown RBP1.03□□□□□ -2.24
NEDD4-211ENST00000514893 RHOXF2Q9BQY4 288 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 SHANK2-AS3Q9BTD1 123 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 NUDT9Q9BW91 350 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 CALN1Q9BXU9 219 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 VPS37BQ9H9H4 285 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 EXOSC4Q9NPD3 245 aaKnown RBP1.03□□□□□ -2.24
NEDD4-211ENST00000514893 RRAGDQ9NQL2 400 aaPredicted RBP1.03□□□□□ -2.24
NEDD4-211ENST00000514893 ZC4H2Q9NQZ6 224 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 C8orf17Q9NRJ1 99 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 MCUBQ9NWR8 336 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 MYEF2Q9P2K5 600 aaKnown RBP1.03□□□□□ -2.24
NEDD4-211ENST00000514893 CBY1Q9Y3M2 126 aa1.03□□□□□ -2.24
NEDD4-211ENST00000514893 PCM1Q15154 2024 aa1.03□□□□□ -2.25
NEDD4-211ENST00000514893 SERTM2A0A1B0GWG4 89 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 TMEM120BA0PK00 339 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 ZNF98A6NK75 572 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 SUPT3HB4E1H0 165 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 K7EMT4 169 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 PTPRTO14522 1441 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 DNALI1O14645 258 aaPredicted RBP1.02□□□□□ -2.25
NEDD4-211ENST00000514893 BCKDKO14874 412 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 PLIN3O60664 434 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 FCN3O75636 299 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 GATBO75879 557 aaKnown RBP1.02□□□□□ -2.25
NEDD4-211ENST00000514893 SCO1O75880 301 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 GLSO94925 669 aaPredicted RBP1.02□□□□□ -2.25
NEDD4-211ENST00000514893 OR2F2O95006 317 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 TDP2O95551 362 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 HPRT1P00492 218 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 KRT14P02533 472 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 GLAP06280 429 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 TPM2P07951 284 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 PGA5P0DJD9 388 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 THRAP10827 490 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 STOMP27105 288 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 APLNRP35414 380 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 GPR1P46091 355 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 GFERP55789 205 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 CMC4P56277 68 aaPredicted RBP1.02□□□□□ -2.25
NEDD4-211ENST00000514893 AP1S2P56377 157 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 ZNF121P58317 390 aaPredicted RBP1.02□□□□□ -2.25
NEDD4-211ENST00000514893 LRRC74AQ0VAA2 488 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 BAMBIQ13145 260 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 NAB1Q13506 487 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 PNOCQ13519 176 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 WDR43Q15061 677 aaKnown RBP eCLIP1.02□□□□□ -2.25
NEDD4-211ENST00000514893 LUZP6Q538Z0 58 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 RNASE13Q5GAN3 156 aaKnown RBP1.02□□□□□ -2.25
NEDD4-211ENST00000514893 TEX30Q5JUR7 227 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 THOC7Q6I9Y2 204 aaKnown RBP1.02□□□□□ -2.25
NEDD4-211ENST00000514893 CD300LGQ6UXG3 332 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 UNC93AQ86WB7 457 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 MICU2Q8IYU8 434 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 OFCC1Q8IZS5 231 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 JAGN1Q8N5M9 183 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 MIR7-3HGQ8N6C7 128 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 ZNF680Q8NEM1 530 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 BPIFCQ8NFQ6 507 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 DCAKDQ8WVC6 231 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 NRGNQ92686 78 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 RBPMSQ93062 196 aaKnown RBP1.02□□□□□ -2.25
NEDD4-211ENST00000514893 C8orf44Q96CB5 159 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 SEH1LQ96EE3 360 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 Q96MT0 163 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 ANKRD60Q9BZ19 345 aa1.02□□□□□ -2.25
NEDD4-211ENST00000514893 NAA50Q9GZZ1 169 aaKnown RBP1.02□□□□□ -2.25
NEDD4-211ENST00000514893 IQCGQ9H095 443 aaKnown RBP1.02□□□□□ -2.25
NEDD4-211ENST00000514893 NEUROG2Q9H2A3 272 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms