RNA–Protein interactions for RNA: ENST00000514326.5

SEC31A-238, Transcript of SEC31 homolog A, COPII coat complex component, human

TSL 3

Gene SEC31A, Length 847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC31A-238	ENST00000514326	TEAD3	Q99594	435 aa		13.22	□□□□□ -0.29
SEC31A-238	ENST00000514326	GABARAPL1	Q9H0R8	117 aa		13.22	□□□□□ -0.29
SEC31A-238	ENST00000514326	PATZ1	Q9HBE1	687 aa	Known RBP	13.22	□□□□□ -0.29
SEC31A-238	ENST00000514326	UFSP2	Q9NUQ7	469 aa		13.22	□□□□□ -0.29
SEC31A-238	ENST00000514326	PCDHB10	Q9UN67	800 aa		13.22	□□□□□ -0.29
SEC31A-238	ENST00000514326	MXRA5	Q9NR99	2828 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	ZAR1L	A6NP61	321 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	IFNL4	K9M1U5	179 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	XRCC2	O43543	280 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	MRPL3	P09001	348 aa	Known RBP	13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	FCGR1A	P12314	374 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	CD200	P41217	278 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	SEC61A1	P61619	476 aa	Known RBP	13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	MPPED2	Q15777	294 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	TIGD6	Q17RP2	521 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	GFOD2	Q3B7J2	385 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	TMEM155	Q4W5P6	130 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	SLX4IP	Q5VYV7	408 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	LRRN1	Q6UXK5	716 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	CCDC121	Q6ZUS5	278 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	SLC16A9	Q7RTY1	509 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	SPIC	Q8N5J4	248 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	TCEANC	Q8N8B7	351 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	ZNF454	Q8N9F8	522 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	PYDC1	Q8WXC3	89 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	REEP6	Q96HR9	211 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	PGAM5	Q96HS1	289 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	ADAT1	Q9BUB4	502 aa	Known RBP	13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	TMPRSS13	Q9BYE2	586 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	TMEM165	Q9HC07	324 aa		13.21	□□□□□ -0.29
SEC31A-238	ENST00000514326	SAC3D1	A6NKF1	404 aa		13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	RNF212B	A8MTL3	300 aa		13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	FAM20B	O75063	409 aa		13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	PNP	P00491	289 aa		13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	APOC1	P02654	83 aa		13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	ALOX5AP	P20292	161 aa		13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	POLR2I	P36954	125 aa	Known RBP	13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	MDH2	P40926	338 aa	Known RBP	13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	GATA4	P43694	442 aa		13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	RAD23A	P54725	363 aa		13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	FAM3A	P98173	230 aa		13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	KPNB1	Q14974	876 aa	Known RBP	13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	KLHL36	Q8N4N3	616 aa		13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	CELF2-AS1	Q8N7Q2	184 aa		13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	C19orf18	Q8NEA5	215 aa		13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	CENPN	Q96H22	339 aa	Predicted RBP	13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	CIB1	Q99828	191 aa		13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	SLC22A4	Q9H015	551 aa		13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	OPA3	Q9H6K4	179 aa		13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	METTL17	Q9H7H0	456 aa	Predicted RBP	13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	PPP1R3E	Q9H7J1	279 aa		13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	MRPL15	Q9P015	296 aa	Known RBP	13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	LAMP5	Q9UJQ1	280 aa		13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	OAZ3	Q9UMX2	235 aa		13.2	□□□□□ -0.3
SEC31A-238	ENST00000514326	COL6A5	A8TX70	2615 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	LOC105371242	A0A075B767	164 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326		A0A0G2JMP0	313 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326		A0A0X1KG70	313 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	hCG_38984	A0A1B0GV85	526 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	LRRC30	A6NM36	301 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	CEACAM18	A8MTB9	384 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	PRR32	B1ATL7	298 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326		F5H0A9	414 aa	Predicted RBP	13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	PSMD9	O00233	223 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	GMDS	O60547	372 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	THBS2	P35442	1172 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	GSK3A	P49840	483 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	EFNB1	P98172	346 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	ZNF181	Q2M3W8	571 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	DCAF12L2	Q5VW00	463 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	C12orf73	Q69YU5	71 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	RHOU	Q7L0Q8	258 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	OR4M2	Q8NGB6	313 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	OR52H1	Q8NGJ2	320 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	IL4I1	Q96RQ9	567 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	PKP2	Q99959	881 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	TMEM246	Q9BRR3	403 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	TTTY10	Q9BZA0	68 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	YIPF3	Q9GZM5	350 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	OR10A2	Q9H208	303 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	SP140L	Q9H930	580 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	MMP26	Q9NRE1	261 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	COPS3	Q9UNS2	423 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	LRP12	Q9Y561	859 aa		13.19	□□□□□ -0.3
SEC31A-238	ENST00000514326	TRAPPC2L	H3BP13	241 aa		13.18	□□□□□ -0.3
SEC31A-238	ENST00000514326	FOXH1	O75593	365 aa		13.18	□□□□□ -0.3
SEC31A-238	ENST00000514326	GRP	P07492	148 aa		13.18	□□□□□ -0.3
SEC31A-238	ENST00000514326	WNT2	P09544	360 aa		13.18	□□□□□ -0.3
SEC31A-238	ENST00000514326	IRF2	P14316	349 aa		13.18	□□□□□ -0.3
SEC31A-238	ENST00000514326	DDOST	P39656	456 aa		13.18	□□□□□ -0.3
SEC31A-238	ENST00000514326	ACTR3	P61158	418 aa		13.18	□□□□□ -0.3
SEC31A-238	ENST00000514326	LCN1P1	Q5VSP4	162 aa		13.18	□□□□□ -0.3
SEC31A-238	ENST00000514326	AADACL4	Q5VUY2	407 aa		13.18	□□□□□ -0.3
SEC31A-238	ENST00000514326	MEPCE	Q7L2J0	689 aa	Known RBP	13.18	□□□□□ -0.3
SEC31A-238	ENST00000514326	KRT77	Q7Z794	578 aa		13.18	□□□□□ -0.3
SEC31A-238	ENST00000514326	MUC20	Q8N307	709 aa	Predicted RBP	13.18	□□□□□ -0.3
SEC31A-238	ENST00000514326	RFLNB	Q8N5W9	214 aa		13.18	□□□□□ -0.3
SEC31A-238	ENST00000514326	DEFB108B	Q8NET1	73 aa		13.18	□□□□□ -0.3
SEC31A-238	ENST00000514326	OR11L1	Q8NGX0	322 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms