RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 DHRS2Q13268 280 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 ELAVL1Q15717 326 aaKnown RBP6.56□□□□□ -1.36
CLIP1-205ENST00000514271 DEFB110Q30KQ9 67 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 PCGF3Q3KNV8 242 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 Q499Y3 187 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 THEM4Q5T1C6 240 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 RBMS3Q6XE24 437 aaKnown RBP6.56□□□□□ -1.36
CLIP1-205ENST00000514271 DPY19L2P2Q6ZN68 376 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 IZUMO1Q8IYV9 350 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 GTF3AQ92664 365 aaKnown RBP6.56□□□□□ -1.36
CLIP1-205ENST00000514271 LMF1Q96S06 567 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 MCHR1Q99705 422 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 PDCD1LG2Q9BQ51 273 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 SLC25A21Q9BQT8 299 aaPredicted RBP6.56□□□□□ -1.36
CLIP1-205ENST00000514271 BIN3Q9NQY0 253 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 TAS2R8Q9NYW2 309 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 KLHL13Q9P2N7 655 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 TRPC4Q9UBN4 977 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 FLVCR1Q9Y5Y0 555 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 ASXL3Q9C0F0 2248 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 SDK2Q58EX2 2172 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 IGKV3D-11A0A0A0MRZ8 115 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 FEZF1A0PJY2 475 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 MFNGO00587 321 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 REM1O75628 298 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 GLCEO94923 617 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 CH25HO95992 272 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 MPIP34949 423 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 TAS2R41P59536 307 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 TUSC5Q8IXB3 177 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 SVBPQ8N300 66 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 NUP43Q8NFH3 380 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 OR52M1Q8NGK5 317 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 COQ8AQ8NI60 647 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 ZNF519Q8TB69 540 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 ZNF721Q8TF20 911 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 NUDCD2Q8WVJ2 157 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 RCC1LQ96I51 464 aaKnown RBP6.56□□□□□ -1.36
CLIP1-205ENST00000514271 Q96M85 177 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 GPR61Q9BZJ8 451 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 POFUT1Q9H488 388 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 MMP25Q9NPA2 562 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 AK6Q9Y3D8 172 aaKnown RBP6.56□□□□□ -1.36
CLIP1-205ENST00000514271 PTRH2Q9Y3E5 179 aaKnown RBP6.56□□□□□ -1.36
CLIP1-205ENST00000514271 A0A087WUJ7 227 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 OR5H14A6NHG9 310 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 ZNF724A8MTY0 619 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 SLC17A2O00624 439 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 ARPC5O15511 151 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 CYTIPO60759 359 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 C8orf89P0DMQ9 161 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 BTN3A2P78410 334 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 PMP22Q01453 160 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 ARL9Q6T311 187 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 C5orf46Q6UWT4 87 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 SLC16A9Q7RTY1 509 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 TMEM17Q86X19 198 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 HOGA1Q86XE5 327 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 OR9A2Q8NGT5 310 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 OR5AK2Q8NH90 309 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 NEU1Q99519 415 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 LPAR3Q9UBY5 353 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 SLC13A4Q9UKG4 626 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 PIEZO1Q92508 2521 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 C1QTNF9BB2RNN3 333 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 ETV2O00321 342 aaPredicted RBP6.55□□□□□ -1.36
CLIP1-205ENST00000514271 ZNF292O60281 2723 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 KLF7O75840 302 aaPredicted RBP6.55□□□□□ -1.36
CLIP1-205ENST00000514271 TIAF1O95411 115 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 SERPINA7P05543 415 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 C1QTNF9P0C862 333 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 SLC35E2P0CK97 266 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 CSNK2A2P19784 350 aaPredicted RBP6.55□□□□□ -1.36
CLIP1-205ENST00000514271 ALOX5APP20292 161 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 ACKR3P25106 362 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 MAGEB1P43366 347 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 NCBP2P52298 156 aaKnown RBP eCLIP6.55□□□□□ -1.36
CLIP1-205ENST00000514271 LTBQ06643 244 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 KIRREL2Q6UWL6 708 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 CPEB2Q7Z5Q1 589 aaKnown RBP6.55□□□□□ -1.36
CLIP1-205ENST00000514271 SPAG16Q8N0X2 631 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 GABRG1Q8N1C3 465 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 OR5L2Q8NGL0 311 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 ANKRD9Q96BM1 317 aaPredicted RBP6.55□□□□□ -1.36
CLIP1-205ENST00000514271 SPENQ96T58 3664 aaKnown RBP6.55□□□□□ -1.36
CLIP1-205ENST00000514271 CNN2Q99439 309 aaKnown RBP6.55□□□□□ -1.36
CLIP1-205ENST00000514271 LPAR4Q99677 370 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 CMSS1Q9BQ75 279 aaKnown RBP6.55□□□□□ -1.36
CLIP1-205ENST00000514271 ADAT1Q9BUB4 502 aaKnown RBP6.55□□□□□ -1.36
CLIP1-205ENST00000514271 TMEM185BQ9H7F4 350 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 LANCL2Q9NS86 450 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 RNF24Q9Y225 148 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 PCNX3Q9H6A9 2034 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 A0A0A6YYC8 382 aaPredicted RBP6.55□□□□□ -1.36
CLIP1-205ENST00000514271 AHRRA9YTQ3 701 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 TGFBR3LH3BV60 316 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 I3L1I5 382 aaPredicted RBP6.55□□□□□ -1.36
CLIP1-205ENST00000514271 SERPINI2O75830 405 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 WISP2O76076 250 aa6.55□□□□□ -1.36
CLIP1-205ENST00000514271 RCBTB2O95199 551 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms