RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 C6orf136Q5SQH8 315 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 PXDC1Q5TGL8 231 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 ZFAND6Q6FIF0 208 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 DUX4L9Q6RFH8 374 aaPredicted RBP3.88□□□□□ -1.79
HTT-211ENST00000513326 OR5AS1Q8N127 324 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 NANOGP1Q8N7R0 232 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 TEX45Q8NA69 505 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 SCCPDHQ8NBX0 429 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 TMEM116Q8NCL8 245 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 RBM15BQ8NDT2 890 aaKnown RBP3.88□□□□□ -1.79
HTT-211ENST00000513326 SPATA4Q8NEY3 305 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 OR52P1PQ8NH57 321 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 MUC7Q8TAX7 377 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 TMEM163Q8TC26 289 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 RORBQ92753 470 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 THOC1Q96FV9 657 aaKnown RBP3.88□□□□□ -1.79
HTT-211ENST00000513326 SLC41A3Q96GZ6 507 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 LRR1Q96L50 414 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 WDFY2Q96P53 400 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 TRNT1Q96Q11 434 aaKnown RBP3.88□□□□□ -1.79
HTT-211ENST00000513326 ASCL2Q99929 193 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 WFDC6Q9BQY6 131 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 SLC35A5Q9BS91 424 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 GLTPQ9NZD2 209 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 ZNRD1Q9P1U0 126 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 DUX4Q9UBX2 424 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 CLN8Q9UBY8 286 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 TMCC3Q9ULS5 477 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 PPP1R3CQ9UQK1 317 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 TMED5Q9Y3A6 229 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 UGT2A1Q9Y4X1 527 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 USH1CQ9Y6N9 552 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 CAPN7Q9Y6W3 813 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 STARD9Q9P2P6 4700 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 TMEM272A0A1B0GTI8 110 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 EXOC1LA0A1B0GW35 172 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 A0A1B0GWA3 101 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 ANKRD61A6NGH8 418 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 ZNF726A6NNF4 738 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 NPIPB11E5RHQ5 1161 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 F5H5P2 479 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 PLPP3O14495 311 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 ENSAO43768 121 aaKnown RBP3.87□□□□□ -1.79
HTT-211ENST00000513326 OR10H3O60404 316 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 PAGE4O60829 102 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 NDUFB8O95169 186 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 SLC2A10O95528 541 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 DBIP07108 87 aaKnown RBP3.87□□□□□ -1.79
HTT-211ENST00000513326 CCDC159P0C7I6 412 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 PGA4P0DJD7 388 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 PGA3P0DJD8 388 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 UQCRBP14927 111 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 NQO1P15559 274 aaKnown RBP3.87□□□□□ -1.79
HTT-211ENST00000513326 EDN2P20800 178 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 PRPS1L1P21108 318 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 AHCYP23526 432 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 DCTDP32321 178 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 APLNRP35414 380 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 CHI3L1P36222 383 aaPredicted RBP3.87□□□□□ -1.79
HTT-211ENST00000513326 TGFBR2P37173 567 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 ARF6P62330 175 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 ERVK-25P63136 954 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 PSG4Q00888 419 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 HSF2Q03933 536 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 FMODQ06828 376 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 PUDPQ08623 228 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 EGFEM1PQ0D2K5 195 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 MED22Q15528 200 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 TTMPQ5BVD1 217 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 CFAP157Q5JU67 520 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 SPANXN4Q5MJ08 99 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 OTPQ5XKR4 325 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 TMEM53Q6P2H8 277 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 TIFABQ6ZNK6 161 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 LRRC74BQ6ZQY2 392 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 RNF165Q6ZSG1 346 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 SLC16A12Q6ZSM3 486 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 SLC16A14Q7RTX9 510 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 PIWIL3Q7Z3Z3 882 aaKnown RBP3.87□□□□□ -1.79
HTT-211ENST00000513326 VMO1Q7Z5L0 202 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 CALHM3Q86XJ0 350 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 C10orf107Q8IVU9 208 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 FNDC5Q8NAU1 212 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 WFDC9Q8NEX5 89 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 GJC3Q8NFK1 279 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 OR4S1Q8NGB4 309 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 OR8B3Q8NGG8 313 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 OIT3Q8WWZ8 545 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 SNAPC3Q92966 411 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 RPL36ALQ969Q0 106 aaKnown RBP3.87□□□□□ -1.79
HTT-211ENST00000513326 NABP1Q96AH0 204 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 TMEM18Q96B42 140 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 PPP1R36Q96LQ0 422 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 SAMD8Q96LT4 415 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 TECTBQ96PL2 329 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 OR8B2Q96RD0 313 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 DPY30Q9C005 99 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 TRIM15Q9C019 465 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 WNT5BQ9H1J7 359 aa3.87□□□□□ -1.79
HTT-211ENST00000513326 DPAGT1Q9H3H5 408 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms