RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 WDR27A2RRH5 827 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 TXNDC9O14530 226 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 NCR1O76036 304 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 S1PR2O95136 353 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 HBE1P02100 147 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 MT-ND4P03905 459 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 PVRP15151 417 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 SDC1P18827 310 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 CCR7P32248 378 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 RPS9P46781 194 aaKnown RBP5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 NUTF2P61970 127 aaKnown RBP5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 SURF2Q15527 256 aaPredicted RBP5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 WHAMMP3Q1A5X7 153 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 SLC9C1Q4G0N8 1177 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 ZNF585AQ6P3V2 769 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 APLFQ8IW19 511 aaPredicted RBP5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 CPNE9Q8IYJ1 553 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 ZFP41Q8N8Y5 198 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 NEXN-AS1Q8NBZ9 246 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 OR4C13Q8NGP0 309 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 OR6K6Q8NGW6 343 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 FOPNLQ96NB1 174 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 QKIQ96PU8 341 aaKnown RBP eCLIP5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 ARHGDIGQ99819 225 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 C1orf50Q9BV19 199 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 WDR41Q9HAD4 459 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 PNRC2Q9NPJ4 139 aaKnown RBP5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 TPSG1Q9NRR2 321 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 NEU3Q9UQ49 428 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 SLC35A3Q9Y2D2 325 aa5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 EXOSC1Q9Y3B2 195 aaKnown RBP5.34□□□□□ -1.55
TRAPPC11-209ENST00000512476 A0A087WUJ7 227 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 TRBV4-1A0A0J9YWV2 114 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 OR6C6A6NF89 314 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 M0QYV0 167 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 SEC24AO95486 1093 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 GCGP01275 180 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 HOXC4P09017 264 aaPredicted RBP5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 FBP1P09467 338 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 OGNP20774 298 aaKnown RBP5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 ATP5A1P25705 553 aaKnown RBP5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 RPL3P39023 403 aaKnown RBP5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 TNFSF9P41273 254 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 UBE2E1P51965 193 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 PDX1P52945 283 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 HCCSP53701 268 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 ACSBG2Q5FVE4 666 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 CMC1Q7Z7K0 106 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 B3GNT8Q7Z7M8 397 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 OR6T1Q8NGN1 323 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 OR10G9Q8NGN4 311 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 CD200R1Q8TD46 325 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 TNFAIP8L1Q8WVP5 186 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 C11orf40Q8WZ69 217 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 PNPLA2Q96AD5 504 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 HAUS1Q96CS2 278 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 UBE2E2Q96LR5 201 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 ZNF681Q96N22 645 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 SCGB3A2Q96PL1 93 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 CSF3RQ99062 836 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 OVOL2Q9BRP0 275 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 TUBB1Q9H4B7 451 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 TP53TG5Q9Y2B4 290 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 KLF12Q9Y4X4 402 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 OR51B4Q9Y5P0 310 aa5.34□□□□□ -1.56
TRAPPC11-209ENST00000512476 PCM1Q15154 2024 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 MEIOCA2RUB1 952 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 ISPDA4D126 451 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 LRIT2A6NDA9 550 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 GPR31O00270 319 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 LSM8O95777 96 aaKnown RBP5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 CELP19835 753 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 ACRV1P26436 265 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 IFNGR2P38484 337 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 GCLMP48507 274 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 PGFP49763 221 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 TGFBR3Q03167 851 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 RAB40BQ12829 278 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 MPPED2Q15777 294 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 KLHL12Q53G59 568 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 FAM120AOSQ5T036 256 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 PLPP4Q5VZY2 271 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 MBOAT2Q6ZWT7 520 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 SPPL2BQ8TCT7 592 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 Q8WTZ3 238 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 TADA1Q96BN2 335 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 P2RY11Q96G91 374 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 TXNDC15Q96J42 360 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 TBX15Q96SF7 602 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 TMEM59Q9BXS4 323 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 RAB34Q9BZG1 259 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 NHEJ1Q9H9Q4 299 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 ADGRL4Q9HBW9 690 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 OR52A1Q9UKL2 312 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 MTCL1Q9Y4B5 1905 aaKnown RBP5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 BAZ2BQ9UIF8 2168 aaKnown RBP5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 ATAD5Q96QE3 1844 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 UNC119BA6NIH7 251 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 C2CD4DB7Z1M9 353 aa5.33□□□□□ -1.56
TRAPPC11-209ENST00000512476 ANKRD65E5RJM6 399 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms