RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 ABHD6Q9BV23 337 aa10.08□□□□□ -0.8
CHFR-208ENST00000511001 PDP1Q9P0J1 537 aaPredicted RBP10.08□□□□□ -0.8
CHFR-208ENST00000511001 LRCH1Q9Y2L9 728 aa10.08□□□□□ -0.8
CHFR-208ENST00000511001 GGT3PA6NGU5 568 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 GYG2O15488 501 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 FKBP6O75344 327 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 PRKACGP22612 351 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 CDK5Q00535 292 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 PAX8Q06710 450 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 SCGB2A2Q13296 93 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 EIF2B1Q14232 305 aaKnown RBP10.07□□□□□ -0.8
CHFR-208ENST00000511001 FLOT2Q14254 428 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 GINS1Q14691 196 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 OR8G1Q15617 311 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 ESCO2Q56NI9 601 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 KLF17Q5JT82 389 aaPredicted RBP10.07□□□□□ -0.8
CHFR-208ENST00000511001 SPATA24Q86W54 205 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 ERI1Q8IV48 349 aaKnown RBP10.07□□□□□ -0.8
CHFR-208ENST00000511001 PAPD5Q8NDF8 572 aaKnown RBP10.07□□□□□ -0.8
CHFR-208ENST00000511001 C19orf18Q8NEA5 215 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 OR56B2PQ8NGI1 322 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 OR6N2Q8NGY6 317 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 ZFAND2BQ8WV99 257 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 RNF133Q8WVZ7 376 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 ERGIC1Q969X5 290 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 INTS14Q96SY0 518 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 SLC6A7Q99884 636 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 ADAT1Q9BUB4 502 aaKnown RBP10.07□□□□□ -0.8
CHFR-208ENST00000511001 OR51V1Q9H2C8 321 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 NTN4Q9HB63 628 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 ESM1Q9NQ30 184 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 UFSP2Q9NUQ7 469 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 ZNF319Q9P2F9 582 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 POMPQ9Y244 141 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 PPIAL4AQ9Y536 164 aa10.07□□□□□ -0.8
CHFR-208ENST00000511001 GNGT2O14610 69 aa10.06□□□□□ -0.8
CHFR-208ENST00000511001 WIPF1O43516 503 aa10.06□□□□□ -0.8
CHFR-208ENST00000511001 OSMP13725 252 aa10.06□□□□□ -0.8
CHFR-208ENST00000511001 RPS2P15880 293 aaKnown RBP10.06□□□□□ -0.8
CHFR-208ENST00000511001 CPT2P23786 658 aa10.06□□□□□ -0.8
CHFR-208ENST00000511001 POU1F1P28069 291 aa10.06□□□□□ -0.8
CHFR-208ENST00000511001 GSTT1P30711 240 aa10.06□□□□□ -0.8
CHFR-208ENST00000511001 CD80P33681 288 aa10.06□□□□□ -0.8
CHFR-208ENST00000511001 CX3CR1P49238 355 aa10.06□□□□□ -0.8
CHFR-208ENST00000511001 GRB2P62993 217 aaKnown RBP10.06□□□□□ -0.8
CHFR-208ENST00000511001 TAF13Q15543 124 aa10.06□□□□□ -0.8
CHFR-208ENST00000511001 KLHL12Q53G59 568 aa10.06□□□□□ -0.8
CHFR-208ENST00000511001 LYPD2Q6UXB3 125 aa10.06□□□□□ -0.8
CHFR-208ENST00000511001 ZNF841Q6ZN19 808 aa10.06□□□□□ -0.8
CHFR-208ENST00000511001 C1orf87Q8N0U7 546 aa10.06□□□□□ -0.8
CHFR-208ENST00000511001 ZDHHC22Q8N966 263 aa10.06□□□□□ -0.8
CHFR-208ENST00000511001 C22orf15Q8WYQ4 148 aa10.06□□□□□ -0.8
CHFR-208ENST00000511001 ZMYND19Q96E35 227 aaPredicted RBP10.06□□□□□ -0.8
CHFR-208ENST00000511001 NEIL1Q96FI4 390 aaPredicted RBP10.06□□□□□ -0.8
CHFR-208ENST00000511001 SSBP3Q9BWW4 388 aaPredicted RBP10.06□□□□□ -0.8
CHFR-208ENST00000511001 SLC22A4Q9H015 551 aa10.06□□□□□ -0.8
CHFR-208ENST00000511001 TOR3AQ9H497 397 aa10.06□□□□□ -0.8
CHFR-208ENST00000511001 DCLRE1BQ9H816 532 aa10.06□□□□□ -0.8
CHFR-208ENST00000511001 MRPL15Q9P015 296 aaKnown RBP10.06□□□□□ -0.8
CHFR-208ENST00000511001 MIOXQ9UGB7 285 aa10.06□□□□□ -0.8
CHFR-208ENST00000511001 N6AMT1Q9Y5N5 214 aa10.06□□□□□ -0.8
CHFR-208ENST00000511001 AUP1Q9Y679 476 aa10.06□□□□□ -0.8
CHFR-208ENST00000511001 IGHV2-70DA0A0C4DH43 119 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 hCG_38984A0A1B0GV85 526 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 LRRC30A6NM36 301 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 PRR23D1E9PI22 279 aaPredicted RBP10.05□□□□□ -0.8
CHFR-208ENST00000511001 TNFRSF13BO14836 293 aaPredicted RBP10.05□□□□□ -0.8
CHFR-208ENST00000511001 GSC2O15499 205 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 XRCC2O43543 280 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 GMDSO60547 372 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 SELENOFO60613 162 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 PRR23D2P0DMB1 279 aaPredicted RBP10.05□□□□□ -0.8
CHFR-208ENST00000511001 ANXA8P13928 327 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 HOXB6P17509 224 aaKnown RBP10.05□□□□□ -0.8
CHFR-208ENST00000511001 SLC2A5P22732 501 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 OPRL1P41146 370 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 ZNF121P58317 390 aaPredicted RBP10.05□□□□□ -0.8
CHFR-208ENST00000511001 GNB2P62879 340 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 FAM3AP98173 230 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 TMEM236Q5W0B7 351 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 PLBD1Q6P4A8 553 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 SHFQ7M4L6 423 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 SLC16A9Q7RTY1 509 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 BBS1Q8NFJ9 593 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 OR11L1Q8NGX0 322 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 OTULINQ96BN8 352 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 SGK3Q96BR1 496 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 SUCNR1Q9BXA5 334 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 CADM1Q9BY67 442 aaKnown RBP10.05□□□□□ -0.8
CHFR-208ENST00000511001 OPA3Q9H6K4 179 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 SLC25A19Q9HC21 320 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 RNF7Q9UBF6 113 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 DNAJB9Q9UBS3 223 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 ZNF69Q9UC07 566 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 OR5V1Q9UGF6 321 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 NOP16Q9Y3C1 178 aaKnown RBP10.05□□□□□ -0.8
CHFR-208ENST00000511001 LRRC42Q9Y546 428 aa10.05□□□□□ -0.8
CHFR-208ENST00000511001 TBX1O43435 398 aa10.04□□□□□ -0.8
CHFR-208ENST00000511001 E2F6O75461 281 aa10.04□□□□□ -0.8
CHFR-208ENST00000511001 HMGN1P05114 100 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms