RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 P4HA3Q7Z4N8 544 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 NET1Q7Z628 596 aaPredicted RBP2.94□□□□□ -1.94
NUP54-209ENST00000510569 MOB3BQ86TA1 216 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 LHFPL3Q86UP9 236 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 HS3ST5Q8IZT8 346 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 Q8N402 240 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 JAGN1Q8N5M9 183 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 ZNF738Q8NE65 137 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 OR4F6Q8NGB9 312 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 OR2V1Q8NHB1 315 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 FAM110BQ8TC76 370 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 HGDQ93099 445 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 MBOAT7Q96N66 472 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 WFIKKN1Q96NZ8 548 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 XPO6Q96QU8 1125 aaKnown RBP2.94□□□□□ -1.94
NUP54-209ENST00000510569 FMO2Q99518 471 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 TEAD3Q99594 435 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 ELOVL4Q9GZR5 314 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 FAM107BQ9H098 131 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 PORCNQ9H237 461 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 OR51B5Q9H339 312 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 NANSQ9NR45 359 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 INPP5EQ9NRR6 644 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 C1orf123Q9NWV4 160 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 MAT2BQ9NZL9 334 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 CCDC59Q9P031 241 aaKnown RBP2.94□□□□□ -1.94
NUP54-209ENST00000510569 OPN4Q9UHM6 478 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 DIMT1Q9UNQ2 313 aaKnown RBP2.94□□□□□ -1.94
NUP54-209ENST00000510569 PDE10AQ9Y233 779 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 ZNF175Q9Y473 711 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 MRPS18BQ9Y676 258 aaKnown RBP2.94□□□□□ -1.94
NUP54-209ENST00000510569 SAR1BQ9Y6B6 198 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 CASZ1Q86V15 1759 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 RGPD5Q99666 1765 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 TNS3Q68CZ2 1445 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 ECM29Q5VYK3 1845 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 MYH7P12883 1935 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 TRBV9A0A0B4J1U6 114 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 LRP5LA4QPB2 252 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 PSMB11A5LHX3 300 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 SIRPB1O00241 398 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 ACOX3O15254 700 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 SGCEO43556 437 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 SLC19A2O60779 497 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 OAS1P00973 400 aaKnown RBP2.93□□□□□ -1.94
NUP54-209ENST00000510569 IFNW1P05000 195 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 H2BFMP0C1H6 154 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 CT62P0C5K7 136 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 THRAP10827 490 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 NQO1P15559 274 aaKnown RBP2.93□□□□□ -1.94
NUP54-209ENST00000510569 PSMC3P17980 439 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 PGCP20142 388 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 NPR2P20594 1047 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 IMPDH1P20839 514 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 COILP38432 576 aaPredicted RBP2.93□□□□□ -1.94
NUP54-209ENST00000510569 TNFSF9P41273 254 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 MAP3K8P41279 467 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 GPR1P46091 355 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 HTR5AP47898 357 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 PRLHRP49683 370 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 EWSR1Q01844 656 aaKnown RBP eCLIP2.93□□□□□ -1.94
NUP54-209ENST00000510569 STX4Q12846 297 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 SELENBP1Q13228 472 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 ZNF77Q15935 545 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 BSXQ3C1V8 233 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 BRMS1LQ5PSV4 323 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 LY6G6FQ5SQ64 297 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 Q7L0L9 218 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 ANKRD37Q7Z713 158 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 TMEM17Q86X19 198 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 FAM71AQ8IYT1 594 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 PGAM4Q8N0Y7 254 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 ZFP82Q8N141 532 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 ACBD4Q8NC06 268 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 RELL2Q8NC24 303 aaPredicted RBP2.93□□□□□ -1.94
NUP54-209ENST00000510569 OR10A7Q8NGE5 316 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 OR2Y1Q8NGV0 311 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 OR6K2Q8NGY2 324 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 OR5AK3PQ8NH89 298 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 DYNC2LI1Q8TCX1 351 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 MAGEE2Q8TD90 523 aaPredicted RBP2.93□□□□□ -1.94
NUP54-209ENST00000510569 MYDGFQ969H8 173 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 ISOC2Q96AB3 205 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 CCDC42Q96M95 316 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 PRAP1Q96NZ9 151 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 EBNA1BP2Q99848 306 aaKnown RBP2.93□□□□□ -1.94
NUP54-209ENST00000510569 METTL9Q9H1A3 318 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 NIPAL2Q9H841 368 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 CYTL1Q9NRR1 136 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 CMTM6Q9NX76 183 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 BABAM2Q9NXR7 383 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 FZR1Q9UM11 496 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 KLHDC2Q9Y2U9 406 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 V9GYY9 64 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 AKAP11Q9UKA4 1901 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 AFDNP55196 1824 aaKnown RBP2.93□□□□□ -1.94
NUP54-209ENST00000510569 CICQ96RK0 1608 aaPredicted RBP2.93□□□□□ -1.94
NUP54-209ENST00000510569 ADGRA3Q8IWK6 1321 aa2.93□□□□□ -1.94
NUP54-209ENST00000510569 ZNF729A6NN14 1252 aaPredicted RBP2.92□□□□□ -1.94
NUP54-209ENST00000510569 OR2AT4A6NND4 320 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms