RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 ERMAPQ96PL5 475 aaPredicted RBP8.61□□□□□ -1.03
DDX41-211ENST00000510171 CDRT15Q96T59 188 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 PITX2Q99697 317 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 SIRPDQ9H106 197 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 OR52D1Q9H346 318 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 C16orf95Q9H693 158 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 CNTD2Q9H8S5 307 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 SRA1Q9HD15 236 aaKnown RBP8.61□□□□□ -1.03
DDX41-211ENST00000510171 IL1RAPQ9NPH3 570 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 CD300AQ9UGN4 299 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 FAM96BQ9Y3D0 163 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 LHFPL6Q9Y693 200 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 V9GYQ6 96 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 TANC2Q9HCD6 1990 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 IGLV1-36A0A0B4J1U3 117 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 C5orf63A6NC05 138 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 OOEPA6NGQ2 149 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 GMDSO60547 372 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 KRT36O76013 467 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 PPP1R3DO95685 299 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 GYPAP02724 150 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 CA6P23280 308 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 NOS3P29474 1203 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 MXRA7P84157 204 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 COX10Q12887 443 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 C2orf68Q2NKX9 166 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 C11orf91Q3C1V1 193 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 SLC36A3Q495N2 470 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 RPL13AP3Q6NVV1 102 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 BTN2A1Q7KYR7 527 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 MRPL21Q7Z2W9 205 aaKnown RBP8.6□□□□□ -1.03
DDX41-211ENST00000510171 PIGWQ7Z7B1 504 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 PDZD9Q8IXQ8 264 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 LINC00471Q8N535 108 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 PLPP7Q8NBV4 271 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 TSSK2Q96PF2 358 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 IFT27Q9BW83 186 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 SMURF1Q9HCE7 757 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 B9D1Q9UPM9 204 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 CAB39Q9Y376 341 aaPredicted RBP8.6□□□□□ -1.03
DDX41-211ENST00000510171 VWFP04275 2813 aa8.6□□□□□ -1.03
DDX41-211ENST00000510171 ZNF816-ZNF321PA0A0X1KG74 233 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 BTBD17A6NE02 478 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 CD300LBA8K4G0 201 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 DCTN6O00399 190 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 DVL1O14640 695 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 TSPAN9O75954 239 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 ALX3O95076 343 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 PTBP3O95758 552 aaKnown RBP8.59□□□□□ -1.03
DDX41-211ENST00000510171 GRPP07492 148 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 CSF1P09603 554 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 RRM2P31350 389 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 MSX2P35548 267 aaPredicted RBP8.59□□□□□ -1.03
DDX41-211ENST00000510171 GGT2P36268 569 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 GSSP48637 474 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 TPTEP56180 551 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 GNGT1P63211 74 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 TRAP1Q12931 704 aaKnown RBP8.59□□□□□ -1.03
DDX41-211ENST00000510171 TSPAN31Q12999 210 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 CDONQ4KMG0 1287 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 HIST2H2BDQ6DRA6 164 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 DHRS7BQ6IAN0 325 aaPredicted RBP8.59□□□□□ -1.03
DDX41-211ENST00000510171 SLC18B1Q6NT16 456 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 CFAP77Q6ZQR2 320 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 ZBTB46Q86UZ6 589 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 ZDHHC21Q8IVQ6 265 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 DEFB107AQ8IZN7 70 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 OR6V1Q8N148 313 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 PIP4P2Q8N4L2 257 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 SLC26A10Q8NG04 563 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 OR52L1Q8NGH7 329 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 OR2AJ1Q8NGZ0 328 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 GNPDA2Q8TDQ7 276 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 NMNAT3Q96T66 252 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 ATF6BQ99941 703 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 ARL8BQ9NVJ2 186 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 C1orf123Q9NWV4 160 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 ACTR3BQ9P1U1 418 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 KPTNQ9Y664 436 aa8.59□□□□□ -1.03
DDX41-211ENST00000510171 A0A1B0GVI7 797 aa8.58□□□□□ -1.04
DDX41-211ENST00000510171 GGT3PA6NGU5 568 aa8.58□□□□□ -1.04
DDX41-211ENST00000510171 A6NLC8 198 aa8.58□□□□□ -1.04
DDX41-211ENST00000510171 HLA-DQA2P01906 255 aa8.58□□□□□ -1.04
DDX41-211ENST00000510171 HIST1H1CP16403 213 aaKnown RBP8.58□□□□□ -1.04
DDX41-211ENST00000510171 TGFBR2P37173 567 aa8.58□□□□□ -1.04
DDX41-211ENST00000510171 HMGA2P52926 109 aa8.58□□□□□ -1.04
DDX41-211ENST00000510171 EGR3Q06889 387 aa8.58□□□□□ -1.04
DDX41-211ENST00000510171 POU4F2Q12837 409 aa8.58□□□□□ -1.04
DDX41-211ENST00000510171 VMO1Q7Z5L0 202 aa8.58□□□□□ -1.04
DDX41-211ENST00000510171 FAM90A1Q86YD7 464 aa8.58□□□□□ -1.04
DDX41-211ENST00000510171 LINC00346Q8IVM7 164 aa8.58□□□□□ -1.04
DDX41-211ENST00000510171 ARHGAP24Q8N264 748 aa8.58□□□□□ -1.04
DDX41-211ENST00000510171 SPERTQ8NA61 448 aa8.58□□□□□ -1.04
DDX41-211ENST00000510171 OR4K13Q8NH42 304 aa8.58□□□□□ -1.04
DDX41-211ENST00000510171 NPRL2Q8WTW4 380 aa8.58□□□□□ -1.04
DDX41-211ENST00000510171 ST8SIA4Q92187 359 aa8.58□□□□□ -1.04
DDX41-211ENST00000510171 ADAT1Q9BUB4 502 aaKnown RBP8.58□□□□□ -1.04
DDX41-211ENST00000510171 MUC13Q9H3R2 512 aa8.58□□□□□ -1.04
DDX41-211ENST00000510171 RPRD1BQ9NQG5 326 aaKnown RBP8.58□□□□□ -1.04
DDX41-211ENST00000510171 KAAG1Q9UBP8 84 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms