RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 NR4A2P43354 598 aa17.13■□□□□ 0.33
HOXC6-204ENST00000509328 ACTC1P68032 377 aa17.13■□□□□ 0.33
HOXC6-204ENST00000509328 ACTA1P68133 377 aa17.13■□□□□ 0.33
HOXC6-204ENST00000509328 IL5RAQ01344 420 aa17.13■□□□□ 0.33
HOXC6-204ENST00000509328 IL18R1Q13478 541 aa17.13■□□□□ 0.33
HOXC6-204ENST00000509328 RIN1Q13671 783 aa17.13■□□□□ 0.33
HOXC6-204ENST00000509328 ZNF771Q7L3S4 317 aaPredicted RBP17.13■□□□□ 0.33
HOXC6-204ENST00000509328 SSX6Q7RTT6 188 aa17.13■□□□□ 0.33
HOXC6-204ENST00000509328 SETD9Q8NE22 299 aa17.13■□□□□ 0.33
HOXC6-204ENST00000509328 ADI1Q9BV57 179 aa17.13■□□□□ 0.33
HOXC6-204ENST00000509328 FAM206AQ9NX38 181 aa17.13■□□□□ 0.33
HOXC6-204ENST00000509328 IL19Q9UHD0 177 aa17.13■□□□□ 0.33
HOXC6-204ENST00000509328 MRM2Q9UI43 246 aaKnown RBP17.13■□□□□ 0.33
HOXC6-204ENST00000509328 ZNF391Q9UJN7 358 aa17.13■□□□□ 0.33
HOXC6-204ENST00000509328 PCDHGB1Q9Y5G3 927 aa17.13■□□□□ 0.33
HOXC6-204ENST00000509328 A0A096LNT2 108 aa17.12■□□□□ 0.33
HOXC6-204ENST00000509328 H0YAE9 185 aa17.12■□□□□ 0.33
HOXC6-204ENST00000509328 MAGEB4O15481 346 aaPredicted RBP17.12■□□□□ 0.33
HOXC6-204ENST00000509328 CDC14BO60729 498 aa17.12■□□□□ 0.33
HOXC6-204ENST00000509328 RP2O75695 350 aa17.12■□□□□ 0.33
HOXC6-204ENST00000509328 CLIC3O95833 236 aa17.12■□□□□ 0.33
HOXC6-204ENST00000509328 KRT8P05787 483 aa17.12■□□□□ 0.33
HOXC6-204ENST00000509328 DBTP11182 482 aaKnown RBP17.12■□□□□ 0.33
HOXC6-204ENST00000509328 DDOSTP39656 456 aa17.12■□□□□ 0.33
HOXC6-204ENST00000509328 CAPGP40121 348 aa17.12■□□□□ 0.33
HOXC6-204ENST00000509328 MMP16P51512 607 aa17.12■□□□□ 0.33
HOXC6-204ENST00000509328 FAM3AP98173 230 aa17.12■□□□□ 0.33
HOXC6-204ENST00000509328 ZNF91Q05481 1191 aa17.12■□□□□ 0.33
HOXC6-204ENST00000509328 GFOD2Q3B7J2 385 aa17.12■□□□□ 0.33
HOXC6-204ENST00000509328 OR8B12Q8NGG6 310 aa17.12■□□□□ 0.33
HOXC6-204ENST00000509328 APH1BQ8WW43 257 aa17.12■□□□□ 0.33
HOXC6-204ENST00000509328 BPESC1Q9GZL8 116 aa17.12■□□□□ 0.33
HOXC6-204ENST00000509328 SLC22A4Q9H015 551 aa17.12■□□□□ 0.33
HOXC6-204ENST00000509328 ZNF275Q9NSD4 429 aaPredicted RBP17.12■□□□□ 0.33
HOXC6-204ENST00000509328 EXOGQ9Y2C4 368 aaKnown RBP17.12■□□□□ 0.33
HOXC6-204ENST00000509328 NOP16Q9Y3C1 178 aaKnown RBP17.12■□□□□ 0.33
HOXC6-204ENST00000509328 RPL36Q9Y3U8 105 aaKnown RBP17.12■□□□□ 0.33
HOXC6-204ENST00000509328 hCG_38984A0A1B0GV85 526 aa17.11■□□□□ 0.33
HOXC6-204ENST00000509328 J3QRE1 110 aa17.11■□□□□ 0.33
HOXC6-204ENST00000509328 MLNRO43193 412 aa17.11■□□□□ 0.33
HOXC6-204ENST00000509328 WBP4O75554 376 aaKnown RBP17.11■□□□□ 0.33
HOXC6-204ENST00000509328 SULT1C4O75897 302 aa17.11■□□□□ 0.33
HOXC6-204ENST00000509328 TNFRSF1AP19438 455 aa17.11■□□□□ 0.33
HOXC6-204ENST00000509328 USF1P22415 310 aaPredicted RBP17.11■□□□□ 0.33
HOXC6-204ENST00000509328 TMEM33P57088 247 aa17.11■□□□□ 0.33
HOXC6-204ENST00000509328 ZNF85Q03923 595 aa17.11■□□□□ 0.33
HOXC6-204ENST00000509328 LOXL1Q08397 574 aaPredicted RBP17.11■□□□□ 0.33
HOXC6-204ENST00000509328 HFEQ30201 348 aa17.11■□□□□ 0.33
HOXC6-204ENST00000509328 ZNF684Q5T5D7 378 aa17.11■□□□□ 0.33
HOXC6-204ENST00000509328 BIVMQ86UB2 503 aa17.11■□□□□ 0.33
HOXC6-204ENST00000509328 YIPF7Q8N8F6 280 aa17.11■□□□□ 0.33
HOXC6-204ENST00000509328 OR10AD1Q8NGE0 317 aa17.11■□□□□ 0.33
HOXC6-204ENST00000509328 OR56B2PQ8NGI1 322 aa17.11■□□□□ 0.33
HOXC6-204ENST00000509328 NRG4Q8WWG1 115 aa17.11■□□□□ 0.33
HOXC6-204ENST00000509328 LGALS12Q96DT0 336 aa17.11■□□□□ 0.33
HOXC6-204ENST00000509328 PBOV1Q9GZY1 135 aa17.11■□□□□ 0.33
HOXC6-204ENST00000509328 MRPL15Q9P015 296 aaKnown RBP17.11■□□□□ 0.33
HOXC6-204ENST00000509328 R4GMQ9 66 aa17.11■□□□□ 0.33
HOXC6-204ENST00000509328 A0A0U1RQV5 110 aa17.1■□□□□ 0.33
HOXC6-204ENST00000509328 METTL15A6NJ78 407 aa17.1■□□□□ 0.33
HOXC6-204ENST00000509328 H0YL77 283 aa17.1■□□□□ 0.33
HOXC6-204ENST00000509328 SRSF10O75494 262 aaKnown RBP17.1■□□□□ 0.33
HOXC6-204ENST00000509328 SRP9P49458 86 aaKnown RBP17.1■□□□□ 0.33
HOXC6-204ENST00000509328 GSK3AP49840 483 aa17.1■□□□□ 0.33
HOXC6-204ENST00000509328 SPRNQ5BIV9 151 aa17.1■□□□□ 0.33
HOXC6-204ENST00000509328 PLEKHG7Q6ZR37 379 aa17.1■□□□□ 0.33
HOXC6-204ENST00000509328 MAPK1IP1LQ8NDC0 245 aa17.1■□□□□ 0.33
HOXC6-204ENST00000509328 ITLN1Q8WWA0 313 aa17.1■□□□□ 0.33
HOXC6-204ENST00000509328 OR2V2Q96R30 315 aa17.1■□□□□ 0.33
HOXC6-204ENST00000509328 MOB1AQ9H8S9 216 aa17.1■□□□□ 0.33
HOXC6-204ENST00000509328 AMBNQ9NP70 447 aa17.1■□□□□ 0.33
HOXC6-204ENST00000509328 NUFIP1Q9UHK0 495 aaKnown RBP17.1■□□□□ 0.33
HOXC6-204ENST00000509328 HSPE1-MOB4S4R3N1 261 aa17.1■□□□□ 0.33
HOXC6-204ENST00000509328 DAPL1A0PJW8 107 aa17.09■□□□□ 0.33
HOXC6-204ENST00000509328 LOC110117498-PIK3R3F6TDL0 507 aa17.09■□□□□ 0.33
HOXC6-204ENST00000509328 H0YJX3 145 aa17.09■□□□□ 0.33
HOXC6-204ENST00000509328 GMDSO60547 372 aa17.09■□□□□ 0.33
HOXC6-204ENST00000509328 PNPP00491 289 aa17.09■□□□□ 0.33
HOXC6-204ENST00000509328 HLA-DPB1P04440 258 aa17.09■□□□□ 0.33
HOXC6-204ENST00000509328 CA6P23280 308 aa17.09■□□□□ 0.33
HOXC6-204ENST00000509328 GPR6P46095 362 aaPredicted RBP17.09■□□□□ 0.33
HOXC6-204ENST00000509328 ISL1P61371 349 aa17.09■□□□□ 0.33
HOXC6-204ENST00000509328 MFGE8Q08431 387 aaPredicted RBP17.09■□□□□ 0.33
HOXC6-204ENST00000509328 RAB40BQ12829 278 aa17.09■□□□□ 0.33
HOXC6-204ENST00000509328 RIPK1Q13546 671 aa17.09■□□□□ 0.33
HOXC6-204ENST00000509328 OR8G1Q15617 311 aa17.09■□□□□ 0.33
HOXC6-204ENST00000509328 OR8B8Q15620 311 aa17.09■□□□□ 0.33
HOXC6-204ENST00000509328 ACBD7Q8N6N7 88 aa17.09■□□□□ 0.33
HOXC6-204ENST00000509328 CSNK2A3Q8NEV1 391 aa17.09■□□□□ 0.33
HOXC6-204ENST00000509328 ITFG2Q969R8 447 aa17.09■□□□□ 0.33
HOXC6-204ENST00000509328 LYZL4Q96KX0 146 aa17.09■□□□□ 0.33
HOXC6-204ENST00000509328 SIGLEC11Q96RL6 698 aa17.09■□□□□ 0.33
HOXC6-204ENST00000509328 MRPS18AQ9NVS2 196 aaKnown RBP17.09■□□□□ 0.33
HOXC6-204ENST00000509328 SNX5Q9Y5X3 404 aa17.09■□□□□ 0.33
HOXC6-204ENST00000509328 CACNG2Q9Y698 323 aa17.09■□□□□ 0.33
HOXC6-204ENST00000509328 ANKRD30BLA7E2S9 258 aa17.08■□□□□ 0.32
HOXC6-204ENST00000509328 F5H5P2 479 aa17.08■□□□□ 0.32
HOXC6-204ENST00000509328 PPIHO43447 177 aaKnown RBP17.08■□□□□ 0.32
HOXC6-204ENST00000509328 FADS2O95864 444 aaKnown RBP17.08■□□□□ 0.32
HOXC6-204ENST00000509328 SNCBQ16143 134 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms