RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 GABRA5P31644 462 aa13.13□□□□□ -0.31
CXCL1-202ENST00000509101 GGT2P36268 569 aa13.13□□□□□ -0.31
CXCL1-202ENST00000509101 RPS6KA3P51812 740 aa13.13□□□□□ -0.31
CXCL1-202ENST00000509101 ZNF92Q03936 586 aa13.13□□□□□ -0.31
CXCL1-202ENST00000509101 ECH1Q13011 328 aa13.13□□□□□ -0.31
CXCL1-202ENST00000509101 SNAI3Q3KNW1 292 aa13.13□□□□□ -0.31
CXCL1-202ENST00000509101 IFI44LQ53G44 452 aa13.13□□□□□ -0.31
CXCL1-202ENST00000509101 SLC35E4Q6ICL7 350 aa13.13□□□□□ -0.31
CXCL1-202ENST00000509101 REC114Q7Z4M0 266 aa13.13□□□□□ -0.31
CXCL1-202ENST00000509101 LNX2Q8N448 690 aa13.13□□□□□ -0.31
CXCL1-202ENST00000509101 GALNT4Q8N4A0 578 aa13.13□□□□□ -0.31
CXCL1-202ENST00000509101 OR2AJ1Q8NGZ0 328 aa13.13□□□□□ -0.31
CXCL1-202ENST00000509101 TOR3AQ9H497 397 aa13.13□□□□□ -0.31
CXCL1-202ENST00000509101 SRA1Q9HD15 236 aaKnown RBP13.13□□□□□ -0.31
CXCL1-202ENST00000509101 PNRC2Q9NPJ4 139 aaKnown RBP13.13□□□□□ -0.31
CXCL1-202ENST00000509101 B9D1Q9UPM9 204 aa13.13□□□□□ -0.31
CXCL1-202ENST00000509101 SIGLEC9Q9Y336 463 aa13.13□□□□□ -0.31
CXCL1-202ENST00000509101 NOTCH3Q9UM47 2321 aa13.13□□□□□ -0.31
CXCL1-202ENST00000509101 RYR3Q15413 4870 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 GGT3PA6NGU5 568 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 BBIP1A8MTZ0 92 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 RNASEK-C17orf49H0YIS7 233 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 M0R135 149 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 NPFFO15130 113 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 TXNDC12O95881 172 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 PAHP00439 452 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 NPPAP01160 153 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 TROVE2P10155 538 aaKnown RBP eCLIP13.12□□□□□ -0.31
CXCL1-202ENST00000509101 EEF1B2P24534 225 aaKnown RBP13.12□□□□□ -0.31
CXCL1-202ENST00000509101 TPTEP56180 551 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 C11orf91Q3C1V1 193 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 FGD3Q5JSP0 725 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 TEX36Q5VZQ5 186 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 METAP1DQ6UB28 335 aaPredicted RBP13.12□□□□□ -0.31
CXCL1-202ENST00000509101 DPY19L2P2Q6ZN68 376 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 C1orf122Q6ZSJ8 110 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 OR6V1Q8N148 313 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 PNKDQ8N490 385 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 PLPP7Q8NBV4 271 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 NPRL2Q8WTW4 380 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 ZNF799Q96GE5 643 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 HSH2DQ96JZ2 352 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 CCL13Q99616 98 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 ANKRD19PQ9H560 264 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 KAAG1Q9UBP8 84 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 FBLN5Q9UBX5 448 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 FOXJ3Q9UPW0 622 aa13.12□□□□□ -0.31
CXCL1-202ENST00000509101 HLA-DQA2P01906 255 aa13.11□□□□□ -0.31
CXCL1-202ENST00000509101 OMPP47874 163 aa13.11□□□□□ -0.31
CXCL1-202ENST00000509101 GUCA2AQ02747 115 aa13.11□□□□□ -0.31
CXCL1-202ENST00000509101 PCK2Q16822 640 aa13.11□□□□□ -0.31
CXCL1-202ENST00000509101 RFX4Q33E94 735 aa13.11□□□□□ -0.31
CXCL1-202ENST00000509101 SLC36A3Q495N2 470 aa13.11□□□□□ -0.31
CXCL1-202ENST00000509101 WDR38Q5JTN6 314 aa13.11□□□□□ -0.31
CXCL1-202ENST00000509101 GLYATL3Q5SZD4 288 aa13.11□□□□□ -0.31
CXCL1-202ENST00000509101 METTL21CQ5VZV1 264 aa13.11□□□□□ -0.31
CXCL1-202ENST00000509101 FKBP9P1Q75LS8 142 aa13.11□□□□□ -0.31
CXCL1-202ENST00000509101 TSEN54Q7Z6J9 526 aaKnown RBP13.11□□□□□ -0.31
CXCL1-202ENST00000509101 CYP4Z1Q86W10 505 aa13.11□□□□□ -0.31
CXCL1-202ENST00000509101 CMTM4Q8IZR5 234 aa13.11□□□□□ -0.31
CXCL1-202ENST00000509101 FAM216BQ8N7L0 139 aa13.11□□□□□ -0.31
CXCL1-202ENST00000509101 OR5R1Q8NH85 324 aa13.11□□□□□ -0.31
CXCL1-202ENST00000509101 ERMAPQ96PL5 475 aaPredicted RBP13.11□□□□□ -0.31
CXCL1-202ENST00000509101 NMNAT3Q96T66 252 aa13.11□□□□□ -0.31
CXCL1-202ENST00000509101 FN3KQ9H479 309 aa13.11□□□□□ -0.31
CXCL1-202ENST00000509101 RPRD1BQ9NQG5 326 aaKnown RBP13.11□□□□□ -0.31
CXCL1-202ENST00000509101 GID8Q9NWU2 228 aa13.11□□□□□ -0.31
CXCL1-202ENST00000509101 ADA2Q9NZK5 511 aa13.11□□□□□ -0.31
CXCL1-202ENST00000509101 MRPL15Q9P015 296 aaKnown RBP13.11□□□□□ -0.31
CXCL1-202ENST00000509101 CYB5R1Q9UHQ9 305 aa13.11□□□□□ -0.31
CXCL1-202ENST00000509101 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.1□□□□□ -0.31
CXCL1-202ENST00000509101 MEIOCA2RUB1 952 aa13.1□□□□□ -0.31
CXCL1-202ENST00000509101 UNC119BA6NIH7 251 aa13.1□□□□□ -0.31
CXCL1-202ENST00000509101 GPR37O15354 613 aa13.1□□□□□ -0.31
CXCL1-202ENST00000509101 RENP00797 406 aa13.1□□□□□ -0.31
CXCL1-202ENST00000509101 LHBP01229 141 aa13.1□□□□□ -0.31
CXCL1-202ENST00000509101 H1F0P07305 194 aaKnown RBP13.1□□□□□ -0.31
CXCL1-202ENST00000509101 SAA4P35542 130 aa13.1□□□□□ -0.31
CXCL1-202ENST00000509101 EFNB2P52799 333 aa13.1□□□□□ -0.31
CXCL1-202ENST00000509101 KLF10Q13118 480 aa13.1□□□□□ -0.31
CXCL1-202ENST00000509101 IKZF1Q13422 519 aa13.1□□□□□ -0.31
CXCL1-202ENST00000509101 CBLL1Q75N03 491 aa13.1□□□□□ -0.31
CXCL1-202ENST00000509101 KLHDC1Q8N7A1 406 aa13.1□□□□□ -0.31
CXCL1-202ENST00000509101 Q8N7P7 452 aa13.1□□□□□ -0.31
CXCL1-202ENST00000509101 SPERTQ8NA61 448 aa13.1□□□□□ -0.31
CXCL1-202ENST00000509101 LY6G5BQ8NDX9 201 aa13.1□□□□□ -0.31
CXCL1-202ENST00000509101 OR56B2PQ8NGI1 322 aa13.1□□□□□ -0.31
CXCL1-202ENST00000509101 FANK1Q8TC84 345 aa13.1□□□□□ -0.31
CXCL1-202ENST00000509101 LRRC29Q8WV35 223 aa13.1□□□□□ -0.31
CXCL1-202ENST00000509101 SPTSSAQ969W0 71 aa13.1□□□□□ -0.31
CXCL1-202ENST00000509101 MAP6Q96JE9 813 aa13.1□□□□□ -0.31
CXCL1-202ENST00000509101 ENPP4Q9Y6X5 453 aa13.1□□□□□ -0.31
CXCL1-202ENST00000509101 LOC100653049A0A140TA62 436 aa13.09□□□□□ -0.31
CXCL1-202ENST00000509101 H3BUX3 64 aa13.09□□□□□ -0.31
CXCL1-202ENST00000509101 CXCR6O00574 342 aa13.09□□□□□ -0.31
CXCL1-202ENST00000509101 BHLHE40O14503 412 aa13.09□□□□□ -0.31
CXCL1-202ENST00000509101 KRT34O76011 436 aa13.09□□□□□ -0.31
CXCL1-202ENST00000509101 SERPINA1P01009 418 aa13.09□□□□□ -0.31
CXCL1-202ENST00000509101 RPS27P42677 84 aaKnown RBP13.09□□□□□ -0.31
CXCL1-202ENST00000509101 MAPRE2Q15555 327 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms