RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 C12orf57Q99622 126 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 TMEM43Q9BTV4 400 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 TBL1XR1Q9BZK7 514 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 SLIRPQ9GZT3 109 aaKnown RBP6.26□□□□□ -1.41
CLCN3-206ENST00000507875 KCNK15Q9H427 330 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 AKIRIN1Q9H9L7 192 aaPredicted RBP6.26□□□□□ -1.41
CLCN3-206ENST00000507875 HMG20AQ9NP66 347 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 C19orf12Q9NSK7 152 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 ICAM5Q9UMF0 924 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 B3GALT5Q9Y2C3 310 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 WIF1Q9Y5W5 379 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 DMXL2Q8TDJ6 3036 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 A0A0B4J2E0 115 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 A0A1B0GX12 115 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 ANKUB1A6NFN9 424 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 OR2AT4A6NND4 320 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 KLRC4-KLRK1H3BQV0 150 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 ADRA2AP08913 450 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 SLC2A1P11166 492 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 GADD45AP24522 165 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 HSD11B1P28845 292 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 TGFBR1P36897 503 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 OMPP47874 163 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 RGS6P49758 472 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 FHITP49789 147 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 SSR4P51571 173 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 UCNP55089 124 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 PRKCDQ05655 676 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 TSPAN31Q12999 210 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 ZNF791Q3KP31 576 aaPredicted RBP6.25□□□□□ -1.41
CLCN3-206ENST00000507875 ARMCX4Q5H9R4 360 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 MRGPREQ86SM8 312 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 RPS19BP1Q86WX3 136 aaKnown RBP6.25□□□□□ -1.41
CLCN3-206ENST00000507875 ZFP82Q8N141 532 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 UBE2J2Q8N2K1 259 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 OR5W2Q8NH69 310 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 ST8SIA1Q92185 356 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 ADOQ96SZ5 270 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 ZNF426Q9BUY5 554 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 ZBTB20Q9HC78 741 aaPredicted RBP6.25□□□□□ -1.41
CLCN3-206ENST00000507875 AKIP1Q9NQ31 210 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 CTPS2Q9NRF8 586 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 TAS2R16Q9NYV7 291 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 RPL36Q9Y3U8 105 aaKnown RBP6.25□□□□□ -1.41
CLCN3-206ENST00000507875 IGF2RP11717 2491 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 SEC16AO15027 2179 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 A0A087WUU8 490 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 IGHV3-20A0A0C4DH32 117 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 LOC101059948A0A1B0GTJ6 334 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 CENPBD1B2RD01 187 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 ETV2O00321 342 aaPredicted RBP6.25□□□□□ -1.41
CLCN3-206ENST00000507875 SIVA1O15304 175 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 ICOSLGO75144 302 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 LYPD3O95274 346 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 CBR1P16152 277 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 SNU13P55769 128 aaKnown RBP6.25□□□□□ -1.41
CLCN3-206ENST00000507875 RAB4BP61018 213 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 CDK5Q00535 292 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 SLC9A3R2Q15599 337 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 PCK2Q16822 640 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 GLYR1Q49A26 553 aaPredicted RBP6.25□□□□□ -1.41
CLCN3-206ENST00000507875 SLC25A53Q5H9E4 307 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 SLC25A30Q5SVS4 291 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 C19orf48Q6RUI8 117 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 RASSF6Q6ZTQ3 369 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 TMPRSS11FQ6ZWK6 438 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 ZDHHC23Q8IYP9 409 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 TCEANCQ8N8B7 351 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 OR6Q1Q8NGQ2 317 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 OR4C3Q8NH37 302 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 DOK4Q8TEW6 326 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 LURAP1Q96LR2 239 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 RASL10BQ96S79 203 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 MGLLQ99685 303 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 GPA33Q99795 319 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 ANGPTL4Q9BY76 406 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 ACTR6Q9GZN1 396 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 SIRPDQ9H106 197 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 DNTTIP1Q9H147 329 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 DCSTAMPQ9H295 470 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 TVP23BQ9NYZ1 205 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 DNAJC27Q9NZQ0 273 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 BAIAP2Q9UQB8 552 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 MED31Q9Y3C7 131 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 KNTC1P50748 2209 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 WDFY3Q8IZQ1 3526 aa6.25□□□□□ -1.41
CLCN3-206ENST00000507875 CPSF4LA6NMK7 179 aaKnown RBP6.24□□□□□ -1.41
CLCN3-206ENST00000507875 PRKYO43930 277 aa6.24□□□□□ -1.41
CLCN3-206ENST00000507875 RPP14O95059 124 aaKnown RBP6.24□□□□□ -1.41
CLCN3-206ENST00000507875 OR2T7P0C7T2 308 aa6.24□□□□□ -1.41
CLCN3-206ENST00000507875 OTX2P32243 289 aa6.24□□□□□ -1.41
CLCN3-206ENST00000507875 GAS1P54826 345 aa6.24□□□□□ -1.41
CLCN3-206ENST00000507875 OR2B6P58173 313 aa6.24□□□□□ -1.41
CLCN3-206ENST00000507875 HERV-K104P63124 156 aa6.24□□□□□ -1.41
CLCN3-206ENST00000507875 FLI1Q01543 452 aaPredicted RBP6.24□□□□□ -1.41
CLCN3-206ENST00000507875 GINS1Q14691 196 aa6.24□□□□□ -1.41
CLCN3-206ENST00000507875 RAET1LQ5VY80 246 aa6.24□□□□□ -1.41
CLCN3-206ENST00000507875 ZNF730Q6ZMV8 503 aa6.24□□□□□ -1.41
CLCN3-206ENST00000507875 IQCF1Q8N6M8 205 aa6.24□□□□□ -1.41
CLCN3-206ENST00000507875 LRRC17Q8N6Y2 441 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms