RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 TMEM212A6NML5 194 aa17.21■□□□□ 0.35
USP53-203ENST00000507597 TNFSF4P23510 183 aa17.21■□□□□ 0.35
USP53-203ENST00000507597 PSMB10P40306 273 aa17.21■□□□□ 0.35
USP53-203ENST00000507597 PPOXP50336 477 aa17.21■□□□□ 0.35
USP53-203ENST00000507597 BDH1Q02338 343 aa17.21■□□□□ 0.35
USP53-203ENST00000507597 SWI5Q1ZZU3 235 aa17.21■□□□□ 0.35
USP53-203ENST00000507597 DOK3Q7L591 496 aa17.21■□□□□ 0.35
USP53-203ENST00000507597 ZNF676Q8N7Q3 588 aa17.21■□□□□ 0.35
USP53-203ENST00000507597 GATAD2BQ8WXI9 593 aa17.21■□□□□ 0.35
USP53-203ENST00000507597 RAB1BQ9H0U4 201 aa17.21■□□□□ 0.35
USP53-203ENST00000507597 G6PC2Q9NQR9 355 aa17.21■□□□□ 0.35
USP53-203ENST00000507597 ZDHHC8Q9ULC8 765 aa17.21■□□□□ 0.35
USP53-203ENST00000507597 CADP27708 2225 aa17.21■□□□□ 0.35
USP53-203ENST00000507597 UTP20O75691 2785 aaKnown RBP17.2■□□□□ 0.34
USP53-203ENST00000507597 TRBV2A0A0J9YWF9 115 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 ANKRD30BLA7E2S9 258 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 CYSRT1A8MQ03 144 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 IQCF6A8MYZ5 107 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 PNPP00491 289 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 PRF1P14222 555 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 MPV17P39210 176 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 MVKQ03426 396 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 MFGE8Q08431 387 aaPredicted RBP17.2■□□□□ 0.34
USP53-203ENST00000507597 MZT1Q08AG7 82 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 HLXQ14774 488 aaPredicted RBP17.2■□□□□ 0.34
USP53-203ENST00000507597 SPHARQ15513 63 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 FAM209AQ5JX71 171 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 OR2G6Q5TZ20 316 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 OR2T2Q6IF00 324 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 KLBQ86Z14 1044 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 OR8G5Q8NG78 346 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 OR13G1Q8NGZ3 307 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 OR2AE1Q8NHA4 323 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 OR51E1Q8TCB6 317 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 NR1H4Q96RI1 486 aaPredicted RBP17.2■□□□□ 0.34
USP53-203ENST00000507597 ABCB9Q9NP78 766 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 TMEM100Q9NV29 134 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 PAK1IP1Q9NWT1 392 aaPredicted RBP17.2■□□□□ 0.34
USP53-203ENST00000507597 ST6GALNAC2Q9UJ37 374 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 PTPN13Q12923 2485 aa17.2■□□□□ 0.34
USP53-203ENST00000507597 DHRS7CA6NNS2 312 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 CD300LBA8K4G0 201 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 SYT7O43581 403 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 DHRS3O75911 302 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 CLPTM1O96005 669 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 TTRP02766 147 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 MT-ND2P03891 347 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 ISG15P05161 165 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 SOD3P08294 240 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 ZNF81P51508 661 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 FAM3AP98173 230 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 ACSM1Q08AH1 577 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 RIPPLY1Q0D2K3 151 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 MED22Q15528 200 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 TBCEQ15813 527 aaPredicted RBP17.19■□□□□ 0.34
USP53-203ENST00000507597 PCGF3Q3KNV8 242 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 WDR38Q5JTN6 314 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 ZBTB37Q5TC79 503 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 LRP11Q86VZ4 500 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 SPERTQ8NA61 448 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 SEMA6DQ8NFY4 1073 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 OR5AK2Q8NH90 309 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 FCGR1BQ92637 280 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 C10orf35Q96D05 121 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 LURAP1Q96LR2 239 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 POFUT1Q9H488 388 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 VCX3AQ9NNX9 186 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 ISYNA1Q9NPH2 558 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 GPR84Q9NQS5 396 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 MRPL15Q9P015 296 aaKnown RBP17.19■□□□□ 0.34
USP53-203ENST00000507597 FRRS1LQ9P0K9 344 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 SLC22A13Q9Y226 551 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 ABCA4P78363 2273 aa17.19■□□□□ 0.34
USP53-203ENST00000507597 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.18■□□□□ 0.34
USP53-203ENST00000507597 hCG_38984A0A1B0GV85 526 aa17.18■□□□□ 0.34
USP53-203ENST00000507597 GNALP38405 381 aa17.18■□□□□ 0.34
USP53-203ENST00000507597 GSK3AP49840 483 aa17.18■□□□□ 0.34
USP53-203ENST00000507597 IRF3Q14653 427 aa17.18■□□□□ 0.34
USP53-203ENST00000507597 MST1LQ2TV78 715 aa17.18■□□□□ 0.34
USP53-203ENST00000507597 THRSPQ92748 146 aa17.18■□□□□ 0.34
USP53-203ENST00000507597 FAM71F1Q96KD3 344 aaPredicted RBP17.18■□□□□ 0.34
USP53-203ENST00000507597 VRK1Q99986 396 aaPredicted RBP17.18■□□□□ 0.34
USP53-203ENST00000507597 CACNG6Q9BXT2 260 aa17.18■□□□□ 0.34
USP53-203ENST00000507597 PLEKHA1Q9HB21 404 aa17.18■□□□□ 0.34
USP53-203ENST00000507597 BEX4Q9NWD9 120 aaPredicted RBP17.18■□□□□ 0.34
USP53-203ENST00000507597 ZNF319Q9P2F9 582 aa17.18■□□□□ 0.34
USP53-203ENST00000507597 HHLA2Q9UM44 414 aa17.18■□□□□ 0.34
USP53-203ENST00000507597 H7C417 338 aa17.17■□□□□ 0.34
USP53-203ENST00000507597 OGG1O15527 345 aa17.17■□□□□ 0.34
USP53-203ENST00000507597 SERPINA3P01011 423 aa17.17■□□□□ 0.34
USP53-203ENST00000507597 CD8AP01732 235 aa17.17■□□□□ 0.34
USP53-203ENST00000507597 CD1AP06126 327 aa17.17■□□□□ 0.34
USP53-203ENST00000507597 ACHEP22303 614 aa17.17■□□□□ 0.34
USP53-203ENST00000507597 CDK5R1Q15078 307 aa17.17■□□□□ 0.34
USP53-203ENST00000507597 OR8B8Q15620 311 aa17.17■□□□□ 0.34
USP53-203ENST00000507597 C11orf71Q6IPW1 123 aa17.17■□□□□ 0.34
USP53-203ENST00000507597 ZNF773Q6PK81 442 aa17.17■□□□□ 0.34
USP53-203ENST00000507597 OR5AS1Q8N127 324 aa17.17■□□□□ 0.34
USP53-203ENST00000507597 PRSS35Q8N3Z0 413 aa17.17■□□□□ 0.34
USP53-203ENST00000507597 NEU4Q8WWR8 484 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms