RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 ADRA2AP08913 450 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 TACSTD2P09758 323 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 CCDC159P0C7I6 412 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 LIMS3P0CW19 117 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 LIMS4P0CW20 117 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 ATP6V1B1P15313 513 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 ALDH3B1P43353 468 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 ZNF81P51508 661 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 FAM3AP98173 230 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 MFGE8Q08431 387 aaPredicted RBP8.29□□□□□ -1.08
SFXN1-205ENST00000506963 MRPL28Q13084 256 aaKnown RBP8.29□□□□□ -1.08
SFXN1-205ENST00000506963 OR8B8Q15620 311 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 SNCBQ16143 134 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 C6orf141Q5SZD1 244 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 RNLSQ5VYX0 342 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 Q6ZR03 302 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 MRPL21Q7Z2W9 205 aaKnown RBP8.29□□□□□ -1.08
SFXN1-205ENST00000506963 ELMOD2Q8IZ81 293 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 PLPP7Q8NBV4 271 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 OR2AE1Q8NHA4 323 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 RORBQ92753 470 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 GGHQ92820 318 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 PERPQ96FX8 193 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 REEP6Q96HR9 211 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 PGAM5Q96HS1 289 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 SIGLEC11Q96RL6 698 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 SLC30A2Q9BRI3 323 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 PBOV1Q9GZY1 135 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 SLC22A4Q9H015 551 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 MRPL15Q9P015 296 aaKnown RBP8.29□□□□□ -1.08
SFXN1-205ENST00000506963 SNX5Q9Y5X3 404 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 CSMD2Q7Z408 3487 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 CSMD1Q96PZ7 3565 aa8.29□□□□□ -1.08
SFXN1-205ENST00000506963 OTOGQ6ZRI0 2925 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 LOC110117498-PIK3R3F6TDL0 507 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 SLC1A7O00341 560 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 TBX1O43435 398 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 DENRO43583 198 aaKnown RBP8.28□□□□□ -1.08
SFXN1-205ENST00000506963 NDUFS7O75251 213 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 IGHV1-46P01743 117 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 CSF3P09919 207 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 NAT2P11245 290 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 CCL1P22362 96 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 CCR9P51686 369 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 DSCR9P59020 149 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 TNK1Q13470 666 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 TIGD6Q17RP2 521 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 OR2T2Q6IF00 324 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 FAM220AQ7Z4H9 259 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 CATSPERDQ86XM0 798 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 KLBQ86Z14 1044 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 YIPF7Q8N8F6 280 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 ZNF485Q8NCK3 441 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 CSNK2A3Q8NEV1 391 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 OR13G1Q8NGZ3 307 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 TMEM80Q96HE8 168 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 LYZL4Q96KX0 146 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 VRK1Q99986 396 aaPredicted RBP8.28□□□□□ -1.08
SFXN1-205ENST00000506963 RHNO1Q9BSD3 238 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 ALG8Q9BVK2 526 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 TTTY10Q9BZA0 68 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 ACOXLQ9NUZ1 547 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 GNG8Q9UK08 70 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 OR52A1Q9UKL2 312 aa8.28□□□□□ -1.08
SFXN1-205ENST00000506963 CAB39Q9Y376 341 aaPredicted RBP8.28□□□□□ -1.08
SFXN1-205ENST00000506963 EXOSC1Q9Y3B2 195 aaKnown RBP8.28□□□□□ -1.08
SFXN1-205ENST00000506963 NOP16Q9Y3C1 178 aaKnown RBP8.28□□□□□ -1.08
SFXN1-205ENST00000506963 GGT3PA6NGU5 568 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 DHRS7CA6NNS2 312 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 XPNPEP2O43895 674 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 PTBP3O95758 552 aaKnown RBP8.27□□□□□ -1.09
SFXN1-205ENST00000506963 RPSAP08865 295 aaKnown RBP8.27□□□□□ -1.09
SFXN1-205ENST00000506963 TGM4P49221 684 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 GSK3AP49840 483 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 OR12D2P58182 307 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 SLC35A2P78381 396 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 ST3GAL4Q11206 333 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 MED21Q13503 144 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 TP53I3Q53FA7 332 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 Q5PR19 223 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 BCL2L15Q5TBC7 163 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 ZBTB37Q5TC79 503 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 LHFPL3Q86UP9 236 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 ZCCHC24Q8N2G6 241 aaKnown RBP8.27□□□□□ -1.09
SFXN1-205ENST00000506963 ZNF786Q8N393 782 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 CELF2-AS1Q8N7Q2 184 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 CCDC54Q8NEL0 328 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 OR56B2PQ8NGI1 322 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 OR2G2Q8NGZ5 317 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 OR52N1Q8NH53 320 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 RPS4Y2Q8TD47 263 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 SPRYD4Q8WW59 207 aaPredicted RBP8.27□□□□□ -1.09
SFXN1-205ENST00000506963 GTF3AQ92664 365 aaKnown RBP8.27□□□□□ -1.09
SFXN1-205ENST00000506963 PELI1Q96FA3 418 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 C4orf36Q96KX1 117 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 Q9H521 79 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 DUSP21Q9H596 190 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 MSL2Q9HCI7 577 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 BRD7Q9NPI1 651 aa8.27□□□□□ -1.09
SFXN1-205ENST00000506963 GPR84Q9NQS5 396 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms