RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 DCTDP32321 178 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 ATP6V1E1P36543 226 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 RIDAP52758 137 aaKnown RBP15.42■□□□□ 0.06
NPHP4-210ENST00000506941 MRPS11P82912 194 aaKnown RBP15.42■□□□□ 0.06
NPHP4-210ENST00000506941 FAM3AP98173 230 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 IL5RAQ01344 420 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 ZNF85Q03923 595 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 EGR3Q06889 387 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 RIN1Q13671 783 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 GFOD2Q3B7J2 385 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 ZNF684Q5T5D7 378 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 TTC23Q5W5X9 447 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 OR56B2PQ8NGI1 322 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 CNIH3Q8TBE1 160 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 LGALS12Q96DT0 336 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 LYZL4Q96KX0 146 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 DIRC2Q96SL1 478 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 SMR3AQ99954 134 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 PIMREGQ9BSJ6 248 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 OR10A2Q9H208 303 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 OPA3Q9H6K4 179 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 SP140LQ9H930 580 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 DECR2Q9NUI1 292 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 EXOGQ9Y2C4 368 aaKnown RBP15.42■□□□□ 0.06
NPHP4-210ENST00000506941 MTORP42345 2549 aa15.42■□□□□ 0.06
NPHP4-210ENST00000506941 hCG_38984A0A1B0GV85 526 aa15.41■□□□□ 0.06
NPHP4-210ENST00000506941 TMEM269A0A1B0GVZ9 245 aa15.41■□□□□ 0.06
NPHP4-210ENST00000506941 GGT3PA6NGU5 568 aa15.41■□□□□ 0.06
NPHP4-210ENST00000506941 TPD52L2O43399 206 aaKnown RBP15.41■□□□□ 0.06
NPHP4-210ENST00000506941 HLA-DPB1P04440 258 aa15.41■□□□□ 0.06
NPHP4-210ENST00000506941 INHBBP09529 407 aa15.41■□□□□ 0.06
NPHP4-210ENST00000506941 FOSL1P15407 271 aa15.41■□□□□ 0.06
NPHP4-210ENST00000506941 SLC25A16P16260 332 aa15.41■□□□□ 0.06
NPHP4-210ENST00000506941 ACHEP22303 614 aa15.41■□□□□ 0.06
NPHP4-210ENST00000506941 RBMXP38159 391 aaKnown RBP15.41■□□□□ 0.06
NPHP4-210ENST00000506941 CAPGP40121 348 aa15.41■□□□□ 0.06
NPHP4-210ENST00000506941 NR4A2P43354 598 aa15.41■□□□□ 0.06
NPHP4-210ENST00000506941 ISL1P61371 349 aa15.41■□□□□ 0.06
NPHP4-210ENST00000506941 TNFAIP6P98066 277 aaPredicted RBP15.41■□□□□ 0.06
NPHP4-210ENST00000506941 OR13G1Q8NGZ3 307 aa15.41■□□□□ 0.06
NPHP4-210ENST00000506941 SPRYD4Q8WW59 207 aaPredicted RBP15.41■□□□□ 0.06
NPHP4-210ENST00000506941 PPP1R14AQ96A00 147 aa15.41■□□□□ 0.06
NPHP4-210ENST00000506941 Q96MT0 163 aa15.41■□□□□ 0.06
NPHP4-210ENST00000506941 SOX7Q9BT81 388 aa15.41■□□□□ 0.06
NPHP4-210ENST00000506941 BPESC1Q9GZL8 116 aa15.41■□□□□ 0.06
NPHP4-210ENST00000506941 ZNF275Q9NSD4 429 aaPredicted RBP15.41■□□□□ 0.06
NPHP4-210ENST00000506941 CSPG4Q6UVK1 2322 aa15.41■□□□□ 0.06
NPHP4-210ENST00000506941 NSD1Q96L73 2696 aaPredicted RBP15.4■□□□□ 0.06
NPHP4-210ENST00000506941 IGHV1-69-2A0A0G2JMI3 117 aa15.4■□□□□ 0.06
NPHP4-210ENST00000506941 SNTNA6NMZ2 147 aa15.4■□□□□ 0.06
NPHP4-210ENST00000506941 H0YAE9 185 aa15.4■□□□□ 0.06
NPHP4-210ENST00000506941 CRYBB2P43320 205 aa15.4■□□□□ 0.06
NPHP4-210ENST00000506941 GSK3AP49840 483 aa15.4■□□□□ 0.06
NPHP4-210ENST00000506941 MMP16P51512 607 aa15.4■□□□□ 0.06
NPHP4-210ENST00000506941 AQP4P55087 323 aa15.4■□□□□ 0.06
NPHP4-210ENST00000506941 ZNF829Q3KNS6 432 aaPredicted RBP15.4■□□□□ 0.06
NPHP4-210ENST00000506941 ITLN1Q8WWA0 313 aa15.4■□□□□ 0.06
NPHP4-210ENST00000506941 OR2V2Q96R30 315 aa15.4■□□□□ 0.06
NPHP4-210ENST00000506941 EGLN1Q9GZT9 426 aa15.4■□□□□ 0.06
NPHP4-210ENST00000506941 PBOV1Q9GZY1 135 aa15.4■□□□□ 0.06
NPHP4-210ENST00000506941 VCXQ9H320 206 aa15.4■□□□□ 0.06
NPHP4-210ENST00000506941 CHODLQ9H9P2 273 aa15.4■□□□□ 0.06
NPHP4-210ENST00000506941 G6PC2Q9NQR9 355 aa15.4■□□□□ 0.06
NPHP4-210ENST00000506941 TMEM100Q9NV29 134 aa15.4■□□□□ 0.06
NPHP4-210ENST00000506941 TREM2Q9NZC2 230 aa15.4■□□□□ 0.06
NPHP4-210ENST00000506941 MYRFQ9Y2G1 1151 aa15.4■□□□□ 0.06
NPHP4-210ENST00000506941 MALRD1Q5VYJ5 2156 aa15.4■□□□□ 0.06
NPHP4-210ENST00000506941 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.4■□□□□ 0.066e-8■■□□□ 12.2
NPHP4-210ENST00000506941 ACOD1A6NK06 481 aa15.39■□□□□ 0.05
NPHP4-210ENST00000506941 F5H5P2 479 aa15.39■□□□□ 0.05
NPHP4-210ENST00000506941 ATP6V1G2O95670 118 aa15.39■□□□□ 0.05
NPHP4-210ENST00000506941 KRT8P05787 483 aa15.39■□□□□ 0.05
NPHP4-210ENST00000506941 CA6P23280 308 aa15.39■□□□□ 0.05
NPHP4-210ENST00000506941 IL18R1Q13478 541 aa15.39■□□□□ 0.05
NPHP4-210ENST00000506941 YIPF7Q8N8F6 280 aa15.39■□□□□ 0.05
NPHP4-210ENST00000506941 DVL3Q92997 716 aaPredicted RBP15.39■□□□□ 0.05
NPHP4-210ENST00000506941 RNF166Q96A37 237 aaPredicted RBP15.39■□□□□ 0.05
NPHP4-210ENST00000506941 SIGLEC11Q96RL6 698 aa15.39■□□□□ 0.05
NPHP4-210ENST00000506941 GSX1Q9H4S2 264 aaPredicted RBP15.39■□□□□ 0.05
NPHP4-210ENST00000506941 RGCCQ9H4X1 137 aa15.39■□□□□ 0.05
NPHP4-210ENST00000506941 IL19Q9UHD0 177 aa15.39■□□□□ 0.05
NPHP4-210ENST00000506941 NUFIP1Q9UHK0 495 aaKnown RBP15.39■□□□□ 0.05
NPHP4-210ENST00000506941 R4GMQ9 66 aa15.39■□□□□ 0.05
NPHP4-210ENST00000506941 IGHV4-61A0A0C4DH41 118 aa15.38■□□□□ 0.05
NPHP4-210ENST00000506941 A0A0U1RQV5 110 aa15.38■□□□□ 0.05
NPHP4-210ENST00000506941 METTL15A6NJ78 407 aa15.38■□□□□ 0.05
NPHP4-210ENST00000506941 LOC110117498-PIK3R3F6TDL0 507 aa15.38■□□□□ 0.05
NPHP4-210ENST00000506941 SULT1C4O75897 302 aa15.38■□□□□ 0.05
NPHP4-210ENST00000506941 RPP14O95059 124 aaKnown RBP15.38■□□□□ 0.05
NPHP4-210ENST00000506941 IGLV3-1P01715 115 aa15.38■□□□□ 0.05
NPHP4-210ENST00000506941 TTRP02766 147 aa15.38■□□□□ 0.05
NPHP4-210ENST00000506941 TNFSF4P23510 183 aa15.38■□□□□ 0.05
NPHP4-210ENST00000506941 CFL1P23528 166 aaKnown RBP15.38■□□□□ 0.05
NPHP4-210ENST00000506941 ACKR3P25106 362 aa15.38■□□□□ 0.05
NPHP4-210ENST00000506941 ACTC1P68032 377 aa15.38■□□□□ 0.05
NPHP4-210ENST00000506941 ACTA1P68133 377 aa15.38■□□□□ 0.05
NPHP4-210ENST00000506941 KRTAP1-1Q07627 177 aa15.38■□□□□ 0.05
NPHP4-210ENST00000506941 RIPK1Q13546 671 aa15.38■□□□□ 0.05
NPHP4-210ENST00000506941 OR8B8Q15620 311 aa15.38■□□□□ 0.05
NPHP4-210ENST00000506941 TP53I3Q53FA7 332 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms