RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 TMEM210A6NLX4 147 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 ANKRD30BLA7E2S9 258 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 TIMM8AO60220 97 aaPredicted RBP7.24□□□□□ -1.25
PDGFC-205ENST00000506880 SRSF10O75494 262 aaKnown RBP7.24□□□□□ -1.25
PDGFC-205ENST00000506880 DHRS3O75911 302 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 CST4P01036 141 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 ANXA2P07355 339 aaKnown RBP7.24□□□□□ -1.25
PDGFC-205ENST00000506880 SOD3P08294 240 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 FOSL1P15407 271 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 SLC25A16P16260 332 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 GIFP27352 417 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 CFHR2P36980 270 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 PTH2RP49190 550 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 SRP9P49458 86 aaKnown RBP7.24□□□□□ -1.25
PDGFC-205ENST00000506880 ZNF81P51508 661 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 CDH15P55291 814 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 TMEM33P57088 247 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 SLC35A2P78381 396 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 MVKQ03426 396 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 SPOCK1Q08629 439 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 PSG7Q13046 419 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 GK2Q14410 553 aaPredicted RBP7.24□□□□□ -1.25
PDGFC-205ENST00000506880 TRAM1Q15629 374 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 BCL2L15Q5TBC7 163 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 LIPNQ5VXI9 398 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 RPL22L1Q6P5R6 122 aaKnown RBP7.24□□□□□ -1.25
PDGFC-205ENST00000506880 DOK3Q7L591 496 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 PRSS48Q7RTY5 328 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 C1orf87Q8N0U7 546 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 KLHL36Q8N4N3 616 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 PAQR4Q8N4S7 273 aaPredicted RBP7.24□□□□□ -1.25
PDGFC-205ENST00000506880 YIPF7Q8N8F6 280 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 OR52I1Q8NGK6 324 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 PP6455Q8WZ26 134 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 PHYHIPQ92561 330 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 FCGR1BQ92637 280 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 HPS1Q92902 700 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 ELMOD3Q96FG2 381 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 PGAM5Q96HS1 289 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 ALG8Q9BVK2 526 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 MND1Q9BWT6 205 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 CACNG6Q9BXT2 260 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 MRPL37Q9BZE1 423 aaKnown RBP7.24□□□□□ -1.25
PDGFC-205ENST00000506880 COMMD4Q9H0A8 199 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 RHOFQ9HBH0 211 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 TMEM100Q9NV29 134 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 C14orf119Q9NWQ9 140 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 TAAR3PQ9P1P4 343 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 MRM2Q9UI43 246 aaKnown RBP7.24□□□□□ -1.25
PDGFC-205ENST00000506880 STARD10Q9Y365 291 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.24□□□□□ -1.25
PDGFC-205ENST00000506880 DOCK11Q5JSL3 2073 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 ITPR3Q14573 2671 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 OR5B21A6NL26 309 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 ANXA2P2A6NMY6 339 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 CD300LBA8K4G0 201 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 SLC1A7O00341 560 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 GATBO75879 557 aaKnown RBP7.23□□□□□ -1.25
PDGFC-205ENST00000506880 GPANK1O95872 356 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 NGFP01138 241 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 CDK1P06493 297 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 HTR1AP08908 422 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 DBHP09172 617 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 FAM157BP0CG42 384 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 ACHEP22303 614 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 PSMA1P25786 263 aaKnown RBP7.23□□□□□ -1.25
PDGFC-205ENST00000506880 CD200P41217 278 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 ATP5J2P56134 94 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 ZNF85Q03923 595 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 RIPPLY1Q0D2K3 151 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 ST3GAL4Q11206 333 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 CLEC2AQ6UVW9 174 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 LYPD4Q6UWN0 246 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 LRRN1Q6UXK5 716 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 DNM1P46Q6ZS02 220 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 UTS2BQ765I0 119 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.23□□□□□ -1.25
PDGFC-205ENST00000506880 CATSPERDQ86XM0 798 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 ZNF786Q8N393 782 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 STX19Q8N4C7 294 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 SVOPQ8N4V2 548 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 MS4A15Q8N5U1 240 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 Q8TCH9 128 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 SPRYD4Q8WW59 207 aaPredicted RBP7.23□□□□□ -1.25
PDGFC-205ENST00000506880 RDH5Q92781 318 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 CMBLQ96DG6 245 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 REEP6Q96HR9 211 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 FOXN4Q96NZ1 517 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 ZNF649Q9BS31 505 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 PBOV1Q9GZY1 135 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 CHODLQ9H9P2 273 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 G6PC2Q9NQR9 355 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 DUSP13Q9UII6 198 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 OR52A1Q9UKL2 312 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 COPS3Q9UNS2 423 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 SLC22A13Q9Y226 551 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 LRRC42Q9Y546 428 aa7.23□□□□□ -1.25
PDGFC-205ENST00000506880 ZNF816-ZNF321PA0A0X1KG74 233 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 A0A1B0GVI7 797 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 GGT3PA6NGU5 568 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms