RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 C16orf47Q6ZP98 133 aaPredicted RBP1.32□□□□□ -2.2
GYPB-207ENST00000506679 OTUD6AQ7L8S5 288 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 MICU2Q8IYU8 434 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 CBR4Q8N4T8 237 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 CSGALNACT2Q8N6G5 542 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 GPR26Q8NDV2 337 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 C19orf18Q8NEA5 215 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 CCDC148Q8NFR7 591 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 OR5T1Q8NG75 326 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 OR51E1Q8TCB6 317 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 XPO6Q96QU8 1125 aaKnown RBP1.32□□□□□ -2.2
GYPB-207ENST00000506679 TMEM243Q9BU79 118 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 ACTR3CQ9C0K3 210 aaPredicted RBP1.32□□□□□ -2.2
GYPB-207ENST00000506679 SLIRPQ9GZT3 109 aaKnown RBP1.32□□□□□ -2.2
GYPB-207ENST00000506679 MRPS30Q9NP92 439 aaKnown RBP1.32□□□□□ -2.2
GYPB-207ENST00000506679 MYOZ1Q9NP98 299 aaPredicted RBP1.32□□□□□ -2.2
GYPB-207ENST00000506679 C20orf96Q9NUD7 363 aaPredicted RBP1.32□□□□□ -2.2
GYPB-207ENST00000506679 RABL2AQ9UBK7 228 aaPredicted RBP1.32□□□□□ -2.2
GYPB-207ENST00000506679 BAZ2AQ9UIF9 1905 aaKnown RBP1.32□□□□□ -2.2
GYPB-207ENST00000506679 LTBP4Q8N2S1 1624 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 KBTBD11-OT1A0A1B0GTJ5 212 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 SERTM2A0A1B0GWG4 89 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 NDUFC2-KCTD14E9PQ53 114 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 M0R3G1 203 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 SLC9A3R1O14745 358 aaPredicted RBP1.31□□□□□ -2.2
GYPB-207ENST00000506679 PLIN3O60664 434 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 LSM8O95777 96 aaKnown RBP1.31□□□□□ -2.2
GYPB-207ENST00000506679 OXTP01178 125 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 HBE1P02100 147 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 ASGR1P07306 291 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 PGA4P0DJD7 388 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 PGA3P0DJD8 388 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 PGA5P0DJD9 388 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 PFN2P35080 140 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 UQCRFS1P47985 274 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 GDI2P50395 445 aaKnown RBP1.31□□□□□ -2.2
GYPB-207ENST00000506679 FABP6P51161 128 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 NDUFA8P51970 172 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 ART3Q13508 389 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 FAM53BQ14153 422 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 ZNF266Q14584 549 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 GCSAMLQ5JQS6 135 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 STUMQ69YW2 141 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 TMEM53Q6P2H8 277 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 ANGPTL8Q6UXH0 198 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 C12orf54Q6X4T0 127 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 BRD3OSQ6XYD6 125 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 LRP11Q86VZ4 500 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 TTC29Q8NA56 475 aaPredicted RBP1.31□□□□□ -2.2
GYPB-207ENST00000506679 C1orf64Q8NEQ6 169 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 OR10W1Q8NGF6 305 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 OR5M1Q8NGP8 315 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 OR1J4Q8NGS1 313 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 OR1P1Q8NH06 330 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 WDR34Q96EX3 536 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 KCNS1Q96KK3 526 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 JSRP1Q96MG2 331 aaPredicted RBP1.31□□□□□ -2.2
GYPB-207ENST00000506679 C18orf15Q96N68 181 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 ZFP3Q96NJ6 502 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 PANX1Q96RD7 426 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 ZYG11BQ9C0D3 744 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 TOLLIPQ9H0E2 274 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 CLSTN2Q9H4D0 955 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 DHX35Q9H5Z1 703 aaKnown RBP1.31□□□□□ -2.2
GYPB-207ENST00000506679 MRPL22Q9NWU5 206 aaKnown RBP1.31□□□□□ -2.2
GYPB-207ENST00000506679 RHBDL2Q9NX52 303 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 CLN8Q9UBY8 286 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 PSME2Q9UL46 239 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 CACNA1DQ01668 2161 aa1.31□□□□□ -2.2
GYPB-207ENST00000506679 C2orf16Q68DN1 1984 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 KCNE1BA0A087WTH5 132 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 IGKV3D-11A0A0A0MRZ8 115 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 TRAV25A0A0B4J276 109 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 KIR2DS1A0A191URI9 304 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 SYCE1LA8MT33 242 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 GABRPO00591 440 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 RAD1O60671 282 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 SERPINB7O75635 380 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 P0C880 135 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 OR8G3PP0DMU2 310 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 RALBP11234 206 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 NTF3P20783 257 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 GSTM3P21266 225 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 HTR1DP28221 377 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 TNFSF9P41273 254 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 CCNG1P51959 295 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 UBE2E1P51965 193 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 RBX1P62877 108 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 FLI1Q01543 452 aaPredicted RBP1.3□□□□□ -2.2
GYPB-207ENST00000506679 SPAG1Q07617 926 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 CYP24A1Q07973 514 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 MAD2L1BPQ15013 274 aaPredicted RBP1.3□□□□□ -2.2
GYPB-207ENST00000506679 CASP12Q6UXS9 341 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 RTL4Q6ZR62 310 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 TMCO2Q7Z6W1 182 aaPredicted RBP1.3□□□□□ -2.2
GYPB-207ENST00000506679 KATNAL2Q8IYT4 538 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 JAGN1Q8N5M9 183 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 PQLC3Q8N755 202 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 ZNF645Q8N7E2 425 aa1.3□□□□□ -2.2
GYPB-207ENST00000506679 FAM184AQ8NB25 1140 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms