RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 NPY4RP50391 375 aa6.75□□□□□ -1.33
PPARGC1A-204ENST00000506055 GPR85P60893 370 aa6.75□□□□□ -1.33
PPARGC1A-204ENST00000506055 DCDP81605 110 aaKnown RBP6.75□□□□□ -1.33
PPARGC1A-204ENST00000506055 DEFA5Q01523 94 aa6.75□□□□□ -1.33
PPARGC1A-204ENST00000506055 SMAD4Q13485 552 aaKnown RBP6.75□□□□□ -1.33
PPARGC1A-204ENST00000506055 MICBQ29980 383 aa6.75□□□□□ -1.33
PPARGC1A-204ENST00000506055 TMEM176BQ3YBM2 270 aaPredicted RBP6.75□□□□□ -1.33
PPARGC1A-204ENST00000506055 PLAC9Q5JTB6 97 aa6.75□□□□□ -1.33
PPARGC1A-204ENST00000506055 LCN10Q6JVE6 187 aa6.75□□□□□ -1.33
PPARGC1A-204ENST00000506055 FAM57BQ71RH2 274 aa6.75□□□□□ -1.33
PPARGC1A-204ENST00000506055 ZDHHC22Q8N966 263 aa6.75□□□□□ -1.33
PPARGC1A-204ENST00000506055 OR8B12Q8NGG6 310 aa6.75□□□□□ -1.33
PPARGC1A-204ENST00000506055 OR5L2Q8NGL0 311 aa6.75□□□□□ -1.33
PPARGC1A-204ENST00000506055 LHFPL5Q8TAF8 219 aa6.75□□□□□ -1.33
PPARGC1A-204ENST00000506055 RAB3CQ96E17 227 aa6.75□□□□□ -1.33
PPARGC1A-204ENST00000506055 WDR77Q9BQA1 342 aaPredicted RBP6.75□□□□□ -1.33
PPARGC1A-204ENST00000506055 PHF7Q9BWX1 381 aaPredicted RBP6.75□□□□□ -1.33
PPARGC1A-204ENST00000506055 LPAR5Q9H1C0 372 aa6.75□□□□□ -1.33
PPARGC1A-204ENST00000506055 MBD2Q9UBB5 411 aa6.75□□□□□ -1.33
PPARGC1A-204ENST00000506055 CABIN1Q9Y6J0 2220 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 A0A1W2PNV4 684 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 TMEM14DPA8MWL7 114 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 BET1O15155 118 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 ZNF17P17021 662 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 CNR1P21554 472 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 CX3CR1P49238 355 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 SRSF4Q08170 494 aaKnown RBP6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 ZNF345Q14585 488 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 TMEM71Q6P5X7 295 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 OR2W3Q7Z3T1 314 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 CPEB2Q7Z5Q1 589 aaKnown RBP6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 RABEPKQ7Z6M1 372 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 NAA40Q86UY6 237 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 DTWD2Q8NBA8 298 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 NOXO1Q8NFA2 376 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 TMEM185AQ8NFB2 350 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 OR5D18Q8NGL1 313 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 NPRL2Q8WTW4 380 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 ST6GALNAC5Q9BVH7 336 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 GAREM1Q9H706 876 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 AKIRIN1Q9H9L7 192 aaPredicted RBP6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 PRR13Q9NZ81 148 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 PRELID1Q9Y255 219 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 WIF1Q9Y5W5 379 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 IGLV3-12A0A075B6K2 115 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 A0A1B0GW55 424 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 ZNF726A6NNF4 738 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 CDC14BO60729 498 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 ZFAND5O76080 213 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 DUS4LO95620 317 aaKnown RBP6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 IL2RAP01589 272 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 DUX4L2P0CJ85 424 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 DUX4L3P0CJ86 424 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 DUX4L4P0CJ87 422 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 DUX4L5P0CJ88 424 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 DUX4L6P0CJ89 424 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 DUX4L7P0CJ90 424 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 SERPINF1P36955 418 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 PTGDSP41222 190 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 SNTB1Q13884 538 aaKnown RBP6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 SGCAQ16586 387 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 PRAMEF20Q5VT98 475 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 ZNF529Q6P280 563 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 GUSBP11Q6P575 273 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 TFAP2EQ6VUC0 442 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 MOB3CQ70IA8 216 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 EIF4E3Q8N5X7 224 aaKnown RBP6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 ZNF283Q8N7M2 679 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 BPIFCQ8NFQ6 507 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 TERB2Q8NHR7 220 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 KCNG3Q8TAE7 436 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 ARHGAP5-AS1Q96IT6 56 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 CRB3Q9BUF7 120 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 PCED1AQ9H1Q7 454 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 CHMP1AQ9HD42 196 aaPredicted RBP6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 DUX4Q9UBX2 424 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 GLS2Q9UI32 602 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 CSAG2Q9Y5P2 127 aa6.74□□□□□ -1.33
PPARGC1A-204ENST00000506055 E9PLN8 166 aa6.73□□□□□ -1.33
PPARGC1A-204ENST00000506055 TRIM77I1YAP6 450 aa6.73□□□□□ -1.33
PPARGC1A-204ENST00000506055 TRAF3IP2O43734 574 aaPredicted RBP6.73□□□□□ -1.33
PPARGC1A-204ENST00000506055 RAD51DO75771 328 aa6.73□□□□□ -1.33
PPARGC1A-204ENST00000506055 SCGNO76038 276 aa6.73□□□□□ -1.33
PPARGC1A-204ENST00000506055 PLATP00750 562 aa6.73□□□□□ -1.33
PPARGC1A-204ENST00000506055 CHRM2P08172 466 aa6.73□□□□□ -1.33
PPARGC1A-204ENST00000506055 PGAM2P15259 253 aa6.73□□□□□ -1.33
PPARGC1A-204ENST00000506055 HLA-GP17693 338 aa6.73□□□□□ -1.33
PPARGC1A-204ENST00000506055 MPZP25189 248 aa6.73□□□□□ -1.33
PPARGC1A-204ENST00000506055 PSMB6P28072 239 aa6.73□□□□□ -1.33
PPARGC1A-204ENST00000506055 MSX1P28360 303 aa6.73□□□□□ -1.33
PPARGC1A-204ENST00000506055 P2RY4P51582 365 aa6.73□□□□□ -1.33
PPARGC1A-204ENST00000506055 AKR1C2P52895 323 aa6.73□□□□□ -1.33
PPARGC1A-204ENST00000506055 TMEM50BP56557 158 aa6.73□□□□□ -1.33
PPARGC1A-204ENST00000506055 AKR1C1Q04828 323 aa6.73□□□□□ -1.33
PPARGC1A-204ENST00000506055 ARFRP1Q13795 201 aa6.73□□□□□ -1.33
PPARGC1A-204ENST00000506055 ZNF273Q14593 569 aa6.73□□□□□ -1.33
PPARGC1A-204ENST00000506055 COL19A1Q14993 1142 aa6.73□□□□□ -1.33
PPARGC1A-204ENST00000506055 SLC9A3R2Q15599 337 aa6.73□□□□□ -1.33
PPARGC1A-204ENST00000506055 PAN3Q58A45 887 aaKnown RBP6.73□□□□□ -1.33
PPARGC1A-204ENST00000506055 FAHD2BQ6P2I3 314 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms