RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 RAB1CQ92928 201 aa1.91□□□□□ -2.1
CHD1-203ENST00000505657 NAT6Q93015 286 aa1.91□□□□□ -2.1
CHD1-203ENST00000505657 ISOC2Q96AB3 205 aa1.91□□□□□ -2.1
CHD1-203ENST00000505657 RPEQ96AT9 228 aa1.91□□□□□ -2.1
CHD1-203ENST00000505657 FLYWCH2Q96CP2 140 aaKnown RBP1.91□□□□□ -2.1
CHD1-203ENST00000505657 NRBF2Q96F24 287 aa1.91□□□□□ -2.1
CHD1-203ENST00000505657 C9orf72Q96LT7 481 aa1.91□□□□□ -2.1
CHD1-203ENST00000505657 TIMM29Q9BSF4 260 aa1.91□□□□□ -2.1
CHD1-203ENST00000505657 FAM49BQ9NUQ9 324 aa1.91□□□□□ -2.1
CHD1-203ENST00000505657 SLC39A1Q9NY26 324 aa1.91□□□□□ -2.1
CHD1-203ENST00000505657 ZMAT5Q9UDW3 170 aaKnown RBP1.91□□□□□ -2.1
CHD1-203ENST00000505657 SAR1BQ9Y6B6 198 aa1.91□□□□□ -2.1
CHD1-203ENST00000505657 SCN1AP35498 2009 aa1.91□□□□□ -2.1
CHD1-203ENST00000505657 LOXHD1Q8IVV2 1947 aa1.91□□□□□ -2.1
CHD1-203ENST00000505657 HIVEP2P31629 2446 aa1.9□□□□□ -2.1
CHD1-203ENST00000505657 OR6C74A6NCV1 312 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 SYCE1LA8MT33 242 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 ZNF701M0R085 212 aaPredicted RBP1.9□□□□□ -2.11
CHD1-203ENST00000505657 XRCC2O43543 280 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 NMT2O60551 498 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 SLC19A2O60779 497 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 MPDU1O75352 247 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 FARS2O95363 451 aaKnown RBP1.9□□□□□ -2.11
CHD1-203ENST00000505657 OTCP00480 354 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 ERGP11308 486 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 RAB4AP20338 218 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 GABRR2P28476 465 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 SSTR5P35346 364 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 HCAR3P49019 387 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 CDKN2DP55273 166 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 CLDN18P56856 261 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 CARD18P57730 90 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 UBE2NP61088 152 aaKnown RBP1.9□□□□□ -2.11
CHD1-203ENST00000505657 PPP1CBP62140 327 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 ART3Q13508 389 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 QPRTQ15274 297 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 ORMDL2Q53FV1 153 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 MLIPQ5VWP3 458 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 LINC00523Q86TU6 105 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 HORMAD1Q86X24 394 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 TMEM104Q8NE00 496 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 FBXO36Q8NEA4 188 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 OR5AR1Q8NGP9 310 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 OR6Q1Q8NGQ2 317 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 OR6N1Q8NGY5 312 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 PIFOQ8TCI5 191 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 ZNF488Q96MN9 340 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 RNF145Q96MT1 663 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 TIMM17AQ99595 171 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 DOK1Q99704 481 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 IL22Q9GZX6 179 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 OR52D1Q9H346 318 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 MCUBQ9NWR8 336 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 UBIAD1Q9Y5Z9 338 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 KPTNQ9Y664 436 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 SYNRGQ9UMZ2 1314 aa1.9□□□□□ -2.11
CHD1-203ENST00000505657 SHANK1Q9Y566 2161 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 SMIM26A0A096LP01 95 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 A0A1W2PPV4 95 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 BPY2O14599 106 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 TRDMT1O14717 391 aaKnown RBP1.89□□□□□ -2.11
CHD1-203ENST00000505657 SOCS1O15524 211 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 CDC40O60508 579 aaKnown RBP eCLIP1.89□□□□□ -2.11
CHD1-203ENST00000505657 CDRT1O95170 752 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 HPRT1P00492 218 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 CSTAP01040 98 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 CATP04040 527 aaKnown RBP1.89□□□□□ -2.11
CHD1-203ENST00000505657 CRYGCP07315 174 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 STAG3L2P0CL84 134 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 PGA4P0DJD7 388 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 PGA3P0DJD8 388 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 PGA5P0DJD9 388 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 C1GALT1C1LP0DN25 315 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 CD37P11049 281 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 RAB3AP20336 220 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 DTYMKP23919 212 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 CFHR2P36980 270 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 CXCL12P48061 93 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 ZNF121P58317 390 aaPredicted RBP1.89□□□□□ -2.11
CHD1-203ENST00000505657 SLC39A6Q13433 755 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 C6orf183Q5T699 404 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 H3F3CQ6NXT2 135 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 ZFP1Q6P2D0 407 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 BHLHA15Q7RTS1 189 aaPredicted RBP1.89□□□□□ -2.11
CHD1-203ENST00000505657 UNC93AQ86WB7 457 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 WDFY1Q8IWB7 410 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 COX18Q8N8Q8 333 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 C11orf72Q8NBR9 251 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 OR11H7Q8NGC8 314 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 OR51L1Q8NGJ5 315 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 OR4A15Q8NGL6 344 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 LINC01560Q8TB33 94 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 ITFG1Q8TB96 612 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 TOP1MTQ969P6 601 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 NTAN1Q96AB6 310 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 SEH1LQ96EE3 360 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 SCGB3A2Q96PL1 93 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 CAMK2N2Q96S95 79 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 CALN1Q9BXU9 219 aa1.89□□□□□ -2.11
CHD1-203ENST00000505657 SLIRPQ9GZT3 109 aaKnown RBP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms