RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 RNF121Q9H920 327 aa8.99□□□□□ -0.97
TPM3-217ENST00000504663 ZNF275Q9NSD4 429 aaPredicted RBP8.99□□□□□ -0.97
TPM3-217ENST00000504663 TAS2R4Q9NYW5 299 aa8.99□□□□□ -0.97
TPM3-217ENST00000504663 OSGIN2Q9Y236 505 aa8.99□□□□□ -0.97
TPM3-217ENST00000504663 A3GALT2U3KPV4 340 aa8.99□□□□□ -0.97
TPM3-217ENST00000504663 PCNX1Q96RV3 2341 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 NBASA2RRP1 2371 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 IGHV1-18A0A0C4DH31 117 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 IQCMA0A1B0GVH7 501 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 LOC390937A0A1W2PQ73 354 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 SYT7O43581 403 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 ARL6IP5O75915 188 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 AGFG2O95081 481 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 NGFP01138 241 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 APOC1P02654 83 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 CBR1P16152 277 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 ATF1P18846 271 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 SRMP19623 302 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 MAPK3P27361 379 aaPredicted RBP8.98□□□□□ -0.97
TPM3-217ENST00000504663 UQCRFS1P47985 274 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 TGFBR3Q03167 851 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 FAM27E3Q08E93 113 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 OR8B8Q15620 311 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 DGUOKQ16854 277 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 ZNF404Q494X3 552 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 FAM166AQ6J272 317 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 ZNF544Q6NX49 715 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 SFXN4Q6P4A7 337 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 TPRA1Q86W33 373 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 FAM169BQ8N8A8 192 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 TSEN15Q8WW01 171 aaKnown RBP8.98□□□□□ -0.97
TPM3-217ENST00000504663 NANOS1Q8WY41 292 aaKnown RBP8.98□□□□□ -0.97
TPM3-217ENST00000504663 S100PBPQ96BU1 408 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 SMURF1Q9HCE7 757 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 OBP2BQ9NPH6 170 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 AKIP1Q9NQ31 210 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 FOXJ3Q9UPW0 622 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 DHDHQ9UQ10 334 aa8.98□□□□□ -0.97
TPM3-217ENST00000504663 IGKV1-9A0A0C4DH69 117 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 A0A1B0GVI7 797 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 CIB4A0PJX0 185 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 C5orf49A4QMS7 147 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 CASKO14936 926 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 SMPD2O60906 423 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 DHRS3O75911 302 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 LCATP04180 440 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 THBDP07204 575 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 CECR9P0C854 216 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 SLC2A2P11168 524 aaPredicted RBP8.97□□□□□ -0.97
TPM3-217ENST00000504663 BMP4P12644 408 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 ZNF35P13682 527 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 MYL9P24844 172 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 CALCRP30988 508 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 DDOSTP39656 456 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 SLC6A9P48067 706 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 IDH3GP51553 393 aaPredicted RBP8.97□□□□□ -0.97
TPM3-217ENST00000504663 FAM3AP98173 230 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 ZNF92Q03936 586 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 TAB1Q15750 504 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 FBXL19-AS1Q494R0 122 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 TIMM23BQ5SRD1 257 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 TMEM42Q69YG0 159 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 TMEM211Q6ICI0 200 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 DOK3Q7L591 496 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 DNAAF1Q8NEP3 725 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 SLC30A7Q8NEW0 376 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 OR52H1Q8NGJ2 320 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 OR13C3Q8NGS6 347 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 MCFD2Q8NI22 146 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 UBASH3BQ8TF42 649 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 RND1Q92730 232 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 THRSPQ92748 146 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 CCDC120Q96HB5 630 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 REEP6Q96HR9 211 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 FAM71F1Q96KD3 344 aaPredicted RBP8.97□□□□□ -0.97
TPM3-217ENST00000504663 TSC22D3Q99576 134 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 FGF23Q9GZV9 251 aaPredicted RBP8.97□□□□□ -0.97
TPM3-217ENST00000504663 OR10A2Q9H208 303 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 TPK1Q9H3S4 243 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 PPP1R3EQ9H7J1 279 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 AMDHD2Q9Y303 409 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 STARD10Q9Y365 291 aa8.97□□□□□ -0.97
TPM3-217ENST00000504663 AK6Q9Y3D8 172 aaKnown RBP8.97□□□□□ -0.97
TPM3-217ENST00000504663 MYO7BQ6PIF6 2116 aa8.96□□□□□ -0.97
TPM3-217ENST00000504663 CACNA1BQ00975 2339 aa8.96□□□□□ -0.97
TPM3-217ENST00000504663 A0A0B4J203 849 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 A6NIN4 97 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 DHRS7CA6NNS2 312 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 NOTOA8MTQ0 251 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 EEF1E1-BLOC1S5C9J1V9 151 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 CTDSP2O14595 271 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 EEF1E1O43324 174 aaKnown RBP8.96□□□□□ -0.98
TPM3-217ENST00000504663 TBX1O43435 398 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 C1QL1O75973 258 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 RPLP1P05386 114 aaKnown RBP8.96□□□□□ -0.98
TPM3-217ENST00000504663 RAB3BP20337 219 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 ETV6P41212 452 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 RORCP51449 518 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 UBE2NP61088 152 aaKnown RBP8.96□□□□□ -0.98
TPM3-217ENST00000504663 GK2Q14410 553 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms