RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 TMUB1Q9BVT8 246 aa21.35■■□□□ 1.01
LSM6-202ENST00000502781 ZNF391Q9UJN7 358 aa21.35■■□□□ 1.01
LSM6-202ENST00000502781 CHD3Q12873 2000 aaKnown RBP21.34■■□□□ 1.01
LSM6-202ENST00000502781 ZNF469Q96JG9 3925 aaPredicted RBP21.34■■□□□ 1.01
LSM6-202ENST00000502781 A0A0U1RQV5 110 aa21.34■■□□□ 1.01
LSM6-202ENST00000502781 TRIM64A6NGJ6 449 aa21.34■■□□□ 1.01
LSM6-202ENST00000502781 TRIM64BA6NI03 449 aa21.34■■□□□ 1.01
LSM6-202ENST00000502781 FADS2O95864 444 aaKnown RBP21.34■■□□□ 1.01
LSM6-202ENST00000502781 DDOSTP39656 456 aa21.34■■□□□ 1.01
LSM6-202ENST00000502781 MFGE8Q08431 387 aaPredicted RBP21.34■■□□□ 1.01
LSM6-202ENST00000502781 CDONQ4KMG0 1287 aa21.34■■□□□ 1.01
LSM6-202ENST00000502781 KLHL22Q53GT1 634 aa21.34■■□□□ 1.01
LSM6-202ENST00000502781 LIPNQ5VXI9 398 aa21.34■■□□□ 1.01
LSM6-202ENST00000502781 PLEKHG7Q6ZR37 379 aa21.34■■□□□ 1.01
LSM6-202ENST00000502781 BHLHE23Q8NDY6 225 aa21.34■■□□□ 1.01
LSM6-202ENST00000502781 OR13G1Q8NGZ3 307 aa21.34■■□□□ 1.01
LSM6-202ENST00000502781 FAM168AQ92567 244 aa21.34■■□□□ 1.01
LSM6-202ENST00000502781 SIGLEC11Q96RL6 698 aa21.34■■□□□ 1.01
LSM6-202ENST00000502781 PBOV1Q9GZY1 135 aa21.34■■□□□ 1.01
LSM6-202ENST00000502781 G6PC2Q9NQR9 355 aa21.34■■□□□ 1.01
LSM6-202ENST00000502781 DLL4Q9NR61 685 aa21.34■■□□□ 1.01
LSM6-202ENST00000502781 R4GMQ9 66 aa21.34■■□□□ 1.01
LSM6-202ENST00000502781 CELSR1Q9NYQ6 3014 aa21.33■■□□□ 1.01
LSM6-202ENST00000502781 IGHV4-30-2A0A087WSY4 118 aa21.33■■□□□ 1
LSM6-202ENST00000502781 LOC390937A0A1W2PQ73 354 aa21.33■■□□□ 1
LSM6-202ENST00000502781 DAPL1A0PJW8 107 aa21.33■■□□□ 1
LSM6-202ENST00000502781 NDUFS8O00217 210 aa21.33■■□□□ 1
LSM6-202ENST00000502781 IGLV3-1P01715 115 aa21.33■■□□□ 1
LSM6-202ENST00000502781 PDLIM4P50479 330 aa21.33■■□□□ 1
LSM6-202ENST00000502781 OR8B8Q15620 311 aa21.33■■□□□ 1
LSM6-202ENST00000502781 TSTQ16762 297 aaKnown RBP21.33■■□□□ 1
LSM6-202ENST00000502781 C6orf52Q5T4I8 152 aa21.33■■□□□ 1
LSM6-202ENST00000502781 THAP5Q7Z6K1 395 aa21.33■■□□□ 1
LSM6-202ENST00000502781 OR52I1Q8NGK6 324 aa21.33■■□□□ 1
LSM6-202ENST00000502781 SPRYD4Q8WW59 207 aaPredicted RBP21.33■■□□□ 1
LSM6-202ENST00000502781 RDH5Q92781 318 aa21.33■■□□□ 1
LSM6-202ENST00000502781 ELMOD3Q96FG2 381 aa21.33■■□□□ 1
LSM6-202ENST00000502781 LYZL4Q96KX0 146 aa21.33■■□□□ 1
LSM6-202ENST00000502781 JAM3Q9BX67 310 aa21.33■■□□□ 1
LSM6-202ENST00000502781 MOB1AQ9H8S9 216 aa21.33■■□□□ 1
LSM6-202ENST00000502781 GGT3PA6NGU5 568 aa21.32■■□□□ 1
LSM6-202ENST00000502781 MLNRO43193 412 aa21.32■■□□□ 1
LSM6-202ENST00000502781 GIFP27352 417 aa21.32■■□□□ 1
LSM6-202ENST00000502781 KCTD20Q7Z5Y7 419 aa21.32■■□□□ 1
LSM6-202ENST00000502781 EGFL6Q8IUX8 553 aa21.32■■□□□ 1
LSM6-202ENST00000502781 YIPF7Q8N8F6 280 aa21.32■■□□□ 1
LSM6-202ENST00000502781 OR56B2PQ8NGI1 322 aa21.32■■□□□ 1
LSM6-202ENST00000502781 RNF166Q96A37 237 aaPredicted RBP21.32■■□□□ 1
LSM6-202ENST00000502781 RHNO1Q9BSD3 238 aa21.32■■□□□ 1
LSM6-202ENST00000502781 SAP30LQ9HAJ7 183 aa21.32■■□□□ 1
LSM6-202ENST00000502781 FGF20Q9NP95 211 aaPredicted RBP21.32■■□□□ 1
LSM6-202ENST00000502781 INPP5EQ9NRR6 644 aa21.32■■□□□ 1
LSM6-202ENST00000502781 DECR2Q9NUI1 292 aa21.32■■□□□ 1
LSM6-202ENST00000502781 TMEM100Q9NV29 134 aa21.32■■□□□ 1
LSM6-202ENST00000502781 MRPL15Q9P015 296 aaKnown RBP21.32■■□□□ 1
LSM6-202ENST00000502781 VWC2LB2RUY7 222 aa21.31■■□□□ 1
LSM6-202ENST00000502781 LOC110117498-PIK3R3F6TDL0 507 aa21.31■■□□□ 1
LSM6-202ENST00000502781 FAM20BO75063 409 aa21.31■■□□□ 1
LSM6-202ENST00000502781 RP2O75695 350 aa21.31■■□□□ 1
LSM6-202ENST00000502781 TTRP02766 147 aa21.31■■□□□ 1
LSM6-202ENST00000502781 COL8A2P25067 703 aa21.31■■□□□ 1
LSM6-202ENST00000502781 CRYBB2P43320 205 aa21.31■■□□□ 1
LSM6-202ENST00000502781 GSK3AP49840 483 aa21.31■■□□□ 1
LSM6-202ENST00000502781 SPRNQ5BIV9 151 aa21.31■■□□□ 1
LSM6-202ENST00000502781 IZUMO2Q6UXV1 221 aa21.31■■□□□ 1
LSM6-202ENST00000502781 ELMOD2Q8IZ81 293 aa21.31■■□□□ 1
LSM6-202ENST00000502781 OR2Z1Q8NG97 314 aa21.31■■□□□ 1
LSM6-202ENST00000502781 RORBQ92753 470 aa21.31■■□□□ 1
LSM6-202ENST00000502781 YIPF5Q969M3 257 aa21.31■■□□□ 1
LSM6-202ENST00000502781 ITFG2Q969R8 447 aa21.31■■□□□ 1
LSM6-202ENST00000502781 PPP1R14AQ96A00 147 aa21.31■■□□□ 1
LSM6-202ENST00000502781 IL19Q9UHD0 177 aa21.31■■□□□ 1
LSM6-202ENST00000502781 A0A096LNT2 108 aa21.3■■□□□ 1
LSM6-202ENST00000502781 LYNX1G3V0Z9 82 aa21.3■■□□□ 1
LSM6-202ENST00000502781 LYNX1P0DP58 116 aa21.3■■□□□ 1
LSM6-202ENST00000502781 ACHEP22303 614 aa21.3■■□□□ 1
LSM6-202ENST00000502781 TNFAIP6P98066 277 aaPredicted RBP21.3■■□□□ 1
LSM6-202ENST00000502781 RIN1Q13671 783 aa21.3■■□□□ 1
LSM6-202ENST00000502781 GALEQ14376 348 aa21.3■■□□□ 1
LSM6-202ENST00000502781 GFOD2Q3B7J2 385 aa21.3■■□□□ 1
LSM6-202ENST00000502781 TP53I3Q53FA7 332 aa21.3■■□□□ 1
LSM6-202ENST00000502781 CIARTQ8N365 385 aaPredicted RBP21.3■■□□□ 1
LSM6-202ENST00000502781 EGLN1Q9GZT9 426 aa21.3■■□□□ 1
LSM6-202ENST00000502781 SLC22A4Q9H015 551 aa21.3■■□□□ 1
LSM6-202ENST00000502781 ACOXLQ9NUZ1 547 aa21.3■■□□□ 1
LSM6-202ENST00000502781 ERVK13-1Q9NX77 482 aa21.3■■□□□ 1
LSM6-202ENST00000502781 OR52A1Q9UKL2 312 aa21.3■■□□□ 1
LSM6-202ENST00000502781 SNX5Q9Y5X3 404 aa21.3■■□□□ 1
LSM6-202ENST00000502781 H0YL77 283 aa21.29■■□□□ 1
LSM6-202ENST00000502781 SLC25A16P16260 332 aa21.29■■□□□ 1
LSM6-202ENST00000502781 TNFSF4P23510 183 aa21.29■■□□□ 1
LSM6-202ENST00000502781 LHFPL3Q86UP9 236 aa21.29■■□□□ 1
LSM6-202ENST00000502781 CATSPERDQ86XM0 798 aa21.29■■□□□ 1
LSM6-202ENST00000502781 OR10AD1Q8NGE0 317 aa21.29■■□□□ 1
LSM6-202ENST00000502781 COX4I2Q96KJ9 171 aa21.29■■□□□ 1
LSM6-202ENST00000502781 SOX7Q9BT81 388 aa21.29■■□□□ 1
LSM6-202ENST00000502781 ANKRD60Q9BZ19 345 aa21.29■■□□□ 1
LSM6-202ENST00000502781 CHODLQ9H9P2 273 aa21.29■■□□□ 1
LSM6-202ENST00000502781 PLCXD1Q9NUJ7 323 aa21.29■■□□□ 1
LSM6-202ENST00000502781 GNG8Q9UK08 70 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms