RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 ZNF529Q6P280 563 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 FAM199XQ6PEV8 388 aaPredicted RBP6.61□□□□□ -1.35
PDGFC-203ENST00000502773 OR51D1Q8NGF3 324 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 TMPRSS13Q9BYE2 586 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 PBOV1Q9GZY1 135 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 NELFAQ9H3P2 528 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 GSN-AS1Q9NRJ2 163 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 A0A087X0M5 115 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 LOC102724200A0A096LPH7 203 aaPredicted RBP6.61□□□□□ -1.35
PDGFC-203ENST00000502773 A0A1B0GX30 115 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 F5H5P2 479 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 PSMD9O00233 223 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 ARPC1BO15143 372 aaKnown RBP6.61□□□□□ -1.35
PDGFC-203ENST00000502773 CTAG2O75638 210 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 MT-ND4P03905 459 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 CTSBP07858 339 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 SULT1A3P0DMM9 295 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 SULT1A4P0DMN0 295 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 SLC2A1P11166 492 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 HOXB1P14653 301 aaPredicted RBP6.61□□□□□ -1.35
PDGFC-203ENST00000502773 SLC36A2Q495M3 483 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 OR2B11Q5JQS5 317 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 AWAT2Q6E213 333 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 SFRP4Q6FHJ7 346 aaPredicted RBP6.61□□□□□ -1.35
PDGFC-203ENST00000502773 FADS6Q8N9I5 356 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 CD300LFQ8TDQ1 290 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 ASB5Q8WWX0 329 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 C11orf40Q8WZ69 217 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 UPRTQ96BW1 309 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 C8orf44Q96CB5 159 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 SFXN2Q96NB2 322 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 SPSB2Q99619 263 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 PHB2Q99623 299 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 TIMP4Q99727 224 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 OPN3Q9H1Y3 402 aaPredicted RBP6.61□□□□□ -1.35
PDGFC-203ENST00000502773 OR10A4Q9H209 315 aa6.61□□□□□ -1.35
PDGFC-203ENST00000502773 GDF2Q9UK05 429 aaPredicted RBP6.61□□□□□ -1.35
PDGFC-203ENST00000502773 TMEM131Q92545 1883 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 MS4A18H0YCH9 400 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 TGOLN2O43493 480 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 CA11O75493 328 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 SNAPINO95295 136 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 ZP3P21754 424 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 ACP1P24666 158 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 ZNF93P35789 620 aaPredicted RBP6.6□□□□□ -1.35
PDGFC-203ENST00000502773 CYB561P49447 251 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 PER3P56645 1201 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 RAC3P60763 192 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 MS4A18Q3C1V0 323 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 GXYLT1Q4G148 440 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 TSSK4Q6SA08 328 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 UNQ6126/PRO20091Q6UXV3 157 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 OR13C5Q8NGS8 318 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 OR14L1PQ8NHC6 308 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 PAQR8Q8TEZ7 354 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 RAB3CQ96E17 227 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 ULBP2Q9BZM5 246 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 OR11A1Q9GZK7 315 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 AUNIPQ9H7T9 357 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 IGHV1-45A0A0A0MS14 117 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 HMSDA8MTL9 139 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 CSTBP04080 98 aaKnown RBP6.6□□□□□ -1.35
PDGFC-203ENST00000502773 CTSSP25774 331 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 CD82P27701 267 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 PPT1P50897 306 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 CCR6P51684 374 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 RRADP55042 308 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 MLF1P58340 268 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 OR2B8PP59922 312 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 NANOS3P60323 173 aaKnown RBP6.6□□□□□ -1.35
PDGFC-203ENST00000502773 NRN1LQ496H8 165 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 SLC25A47Q6Q0C1 308 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 DRAM2Q6UX65 266 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 ACBD4Q8NC06 268 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 CPNE4Q96A23 557 aaPredicted RBP6.6□□□□□ -1.35
PDGFC-203ENST00000502773 SPSB1Q96BD6 273 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 LMF1Q96S06 567 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 TMEM185BQ9H7F4 350 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 RPS10-NUDT3A0A1W2PQS6 291 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 OR2W5A6NFC9 320 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 NTN3O00634 580 aaPredicted RBP6.6□□□□□ -1.35
PDGFC-203ENST00000502773 DHHO43323 396 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 SOX15O60248 233 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 MED6O75586 246 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 IFNA17P01571 189 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 AMY2AP04746 511 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 QDPRP09417 244 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 CPT2P23786 658 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 EIF2S3P41091 472 aaKnown RBP6.6□□□□□ -1.35
PDGFC-203ENST00000502773 RPS10P46783 165 aaKnown RBP6.6□□□□□ -1.35
PDGFC-203ENST00000502773 CLDN17P56750 224 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 ARFRP1Q13795 201 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 SNTB1Q13884 538 aaKnown RBP6.6□□□□□ -1.35
PDGFC-203ENST00000502773 ZNF705AQ6ZN79 300 aaPredicted RBP6.6□□□□□ -1.35
PDGFC-203ENST00000502773 SHISA6Q6ZSJ9 500 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 ARRDC1Q8N5I2 433 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 OR14K1Q8NGZ2 314 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 TERB2Q8NHR7 220 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 NANOS1Q8WY41 292 aaKnown RBP6.6□□□□□ -1.35
PDGFC-203ENST00000502773 ATOH1Q92858 354 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms