RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 MRPL15Q9P015 296 aaKnown RBP15.45■□□□□ 0.06
HOXD11-202ENST00000498438 NOP16Q9Y3C1 178 aaKnown RBP15.45■□□□□ 0.06
HOXD11-202ENST00000498438 AP4S1Q9Y587 144 aa15.45■□□□□ 0.06
HOXD11-202ENST00000498438 LOC105371242A0A075B767 164 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 CEACAM18A8MTB9 384 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 F5H0A9 414 aaPredicted RBP15.44■□□□□ 0.06
HOXD11-202ENST00000498438 J3QLI3 93 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 MITFO75030 526 aaPredicted RBP15.44■□□□□ 0.06
HOXD11-202ENST00000498438 FOXH1O75593 365 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 APOC1P02654 83 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 H2BFMP0C1H6 154 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 FASP25445 335 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 ZNF121P58317 390 aaPredicted RBP15.44■□□□□ 0.06
HOXD11-202ENST00000498438 APOFQ13790 326 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 TIGD6Q17RP2 521 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 KRTAP24-1Q3LI83 254 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 FAM201AQ5SY85 155 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 FAM57BQ71RH2 274 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 RHOUQ7L0Q8 258 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 PRSS45Q7RTY3 260 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 C1orf87Q8N0U7 546 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 ZNF454Q8N9F8 522 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 SPATA3Q8NHX4 192 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 Q8TCH9 128 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 DUS3LQ96G46 650 aaKnown RBP15.44■□□□□ 0.06
HOXD11-202ENST00000498438 REEP6Q96HR9 211 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 SP140LQ9H930 580 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 KRT84Q9NSB2 600 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 UFSP2Q9NUQ7 469 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 METRNQ9UJH8 293 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 KLHDC2Q9Y2U9 406 aa15.44■□□□□ 0.06
HOXD11-202ENST00000498438 G3V2T6 193 aa15.43■□□□□ 0.06
HOXD11-202ENST00000498438 GMDSO60547 372 aa15.43■□□□□ 0.06
HOXD11-202ENST00000498438 FAM20BO75063 409 aa15.43■□□□□ 0.06
HOXD11-202ENST00000498438 CIB2O75838 187 aa15.43■□□□□ 0.06
HOXD11-202ENST00000498438 GATA3P23771 443 aa15.43■□□□□ 0.06
HOXD11-202ENST00000498438 ESRRGP62508 458 aa15.43■□□□□ 0.06
HOXD11-202ENST00000498438 PTGES3Q15185 160 aaKnown RBP15.43■□□□□ 0.06
HOXD11-202ENST00000498438 MPPED2Q15777 294 aa15.43■□□□□ 0.06
HOXD11-202ENST00000498438 GFOD2Q3B7J2 385 aa15.43■□□□□ 0.06
HOXD11-202ENST00000498438 SLC16A9Q7RTY1 509 aa15.43■□□□□ 0.06
HOXD11-202ENST00000498438 AMIGO2Q86SJ2 522 aa15.43■□□□□ 0.06
HOXD11-202ENST00000498438 RFLNBQ8N5W9 214 aa15.43■□□□□ 0.06
HOXD11-202ENST00000498438 OR11L1Q8NGX0 322 aa15.43■□□□□ 0.06
HOXD11-202ENST00000498438 THEM6Q8WUY1 208 aa15.43■□□□□ 0.06
HOXD11-202ENST00000498438 LRTOMTQ8WZ04 291 aa15.43■□□□□ 0.06
HOXD11-202ENST00000498438 ERGIC1Q969X5 290 aa15.43■□□□□ 0.06
HOXD11-202ENST00000498438 GABARAPL1Q9H0R8 117 aa15.43■□□□□ 0.06
HOXD11-202ENST00000498438 TMEM165Q9HC07 324 aa15.43■□□□□ 0.06
HOXD11-202ENST00000498438 BRD7Q9NPI1 651 aa15.43■□□□□ 0.06
HOXD11-202ENST00000498438 CCDC182A6NF36 153 aa15.42■□□□□ 0.06
HOXD11-202ENST00000498438 A8MXK9 166 aa15.42■□□□□ 0.06
HOXD11-202ENST00000498438 M0R129 80 aa15.42■□□□□ 0.06
HOXD11-202ENST00000498438 TCF21O43680 179 aa15.42■□□□□ 0.06
HOXD11-202ENST00000498438 PRKYO43930 277 aa15.42■□□□□ 0.06
HOXD11-202ENST00000498438 FCGR1AP12314 374 aa15.42■□□□□ 0.06
HOXD11-202ENST00000498438 IRF2P14316 349 aa15.42■□□□□ 0.06
HOXD11-202ENST00000498438 ADRA2CP18825 462 aa15.42■□□□□ 0.06
HOXD11-202ENST00000498438 FAM3AP98173 230 aa15.42■□□□□ 0.06
HOXD11-202ENST00000498438 ESCO2Q56NI9 601 aa15.42■□□□□ 0.06
HOXD11-202ENST00000498438 KDM4DQ6B0I6 523 aa15.42■□□□□ 0.06
HOXD11-202ENST00000498438 C1QL2Q7Z5L3 287 aa15.42■□□□□ 0.06
HOXD11-202ENST00000498438 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.42■□□□□ 0.06
HOXD11-202ENST00000498438 ZDHHC13Q8IUH4 622 aa15.42■□□□□ 0.06
HOXD11-202ENST00000498438 TEX29Q8N6K0 151 aa15.42■□□□□ 0.06
HOXD11-202ENST00000498438 OR52H1Q8NGJ2 320 aa15.42■□□□□ 0.06
HOXD11-202ENST00000498438 SGK3Q96BR1 496 aa15.42■□□□□ 0.06
HOXD11-202ENST00000498438 PRRG3Q9BZD7 231 aa15.42■□□□□ 0.06
HOXD11-202ENST00000498438 OR10A2Q9H208 303 aa15.42■□□□□ 0.06
HOXD11-202ENST00000498438 FN3KRPQ9HA64 309 aa15.42■□□□□ 0.06
HOXD11-202ENST00000498438 ZNF319Q9P2F9 582 aa15.42■□□□□ 0.06
HOXD11-202ENST00000498438 DOCK11Q5JSL3 2073 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 PPIAL4EA0A075B759 164 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 PPIAL4CA0A0B4J2A2 164 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 hCG_38984A0A1B0GV85 526 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 PPIAL4DF5H284 164 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 PTBP3O95758 552 aaKnown RBP15.41■□□□□ 0.06
HOXD11-202ENST00000498438 MRPL3P09001 348 aaKnown RBP15.41■□□□□ 0.06
HOXD11-202ENST00000498438 PPIAL4FP0DN26 164 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 RPS2P15880 293 aaKnown RBP15.41■□□□□ 0.06
HOXD11-202ENST00000498438 EPHA2P29317 976 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 DDOSTP39656 456 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 ZNF404Q494X3 552 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 LCN1P1Q5VSP4 162 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 LRRN1Q6UXK5 716 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 ASRGL1Q7L266 308 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 KLBQ86Z14 1044 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 PGAM5Q96HS1 289 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 TMEM246Q9BRR3 403 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 OCEL1Q9H607 264 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 C7orf69Q9H7B7 122 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 MMP26Q9NRE1 261 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 OPN4Q9UHM6 478 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 LAMP5Q9UJQ1 280 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 LRCH1Q9Y2L9 728 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 POLR3KQ9Y2Y1 108 aaPredicted RBP15.41■□□□□ 0.06
HOXD11-202ENST00000498438 PPIAL4AQ9Y536 164 aa15.41■□□□□ 0.06
HOXD11-202ENST00000498438 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.4■□□□□ 0.06
HOXD11-202ENST00000498438 ANKRD30BLA7E2S9 258 aa15.4■□□□□ 0.06
HOXD11-202ENST00000498438 TRAPPC2LH3BP13 241 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms