RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 RFT1Q96AA3 541 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 EXOSC8Q96B26 276 aaKnown RBP3.95□□□□□ -1.78
SSR3-209ENST00000498205 TCEAL4Q96EI5 215 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 SLC41A3Q96GZ6 507 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 GPR137Q96N19 417 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 PRAP1Q96NZ9 151 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 DEFB118Q96PH6 123 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 NEDD4LQ96PU5 975 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 OR7D2Q96RA2 312 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 SECISBP2Q96T21 854 aaKnown RBP3.95□□□□□ -1.78
SSR3-209ENST00000498205 MCHR1Q99705 422 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 GPA33Q99795 319 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 KCNS3Q9BQ31 491 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 PRSS27Q9BQR3 290 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 ZNF559Q9BR84 538 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 AICDAQ9GZX7 198 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 CHRNA10Q9GZZ6 450 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 C12orf10Q9HB07 376 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 PRSS16Q9NQE7 514 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 DDX28Q9NUL7 540 aaKnown RBP3.95□□□□□ -1.78
SSR3-209ENST00000498205 PAQR5Q9NXK6 330 aaPredicted RBP3.95□□□□□ -1.78
SSR3-209ENST00000498205 STMN3Q9NZ72 180 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 SLC23A2Q9UGH3 650 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 IL20RAQ9UHF4 553 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 CYB5R1Q9UHQ9 305 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 ZNF107Q9UII5 783 aaPredicted RBP3.95□□□□□ -1.78
SSR3-209ENST00000498205 NDRG2Q9UN36 371 aaKnown RBP3.95□□□□□ -1.78
SSR3-209ENST00000498205 SIGLEC7Q9Y286 467 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 ZNF443Q9Y2A4 671 aaPredicted RBP3.95□□□□□ -1.78
SSR3-209ENST00000498205 RBMX2Q9Y388 322 aaKnown RBP3.95□□□□□ -1.78
SSR3-209ENST00000498205 WDR45Q9Y484 360 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 ATG4BQ9Y4P1 393 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 SLC22A7Q9Y694 548 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 SMAD5-AS1Q9Y6J3 95 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 SPACA6W5XKT8 324 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 UNC79Q9P2D8 2635 aa3.95□□□□□ -1.78
SSR3-209ENST00000498205 SNRNP200O75643 2136 aaKnown RBP3.95□□□□□ -1.78
SSR3-209ENST00000498205 DOCK8Q8NF50 2099 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 PLXND1Q9Y4D7 1925 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 A0A0B4J2E0 115 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 A0A1B0GX12 115 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 NKX6-3A6NJ46 265 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 OR5K4A6NMS3 321 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 RIIAD1A6NNX1 92 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 ZNF879B4DU55 563 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 NPIPB9F8W1W9 429 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 M0R129 80 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 SAP18O00422 153 aaKnown RBP3.94□□□□□ -1.78
SSR3-209ENST00000498205 RTCAO00442 366 aaKnown RBP3.94□□□□□ -1.78
SSR3-209ENST00000498205 BET1O15155 118 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 LCMT2O60294 686 aaKnown RBP3.94□□□□□ -1.78
SSR3-209ENST00000498205 DNAJB6O75190 326 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 REM1O75628 298 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 LYPD3O95274 346 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 APBB3O95704 486 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 ECDO95905 644 aaPredicted RBP3.94□□□□□ -1.78
SSR3-209ENST00000498205 GBAP04062 536 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 IFNA16P05015 189 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 SBK2P0C263 348 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 CD37P11049 281 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 ANXA3P12429 323 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 CPMP14384 443 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 ZNF3P17036 446 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 CELP19835 753 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 AHCYP23526 432 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 CD27P26842 260 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 STOMP27105 288 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 MAPK3P27361 379 aaPredicted RBP3.94□□□□□ -1.78
SSR3-209ENST00000498205 SHC1P29353 583 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 PBLDP30039 288 aaPredicted RBP3.94□□□□□ -1.78
SSR3-209ENST00000498205 FEN1P39748 380 aaKnown RBP3.94□□□□□ -1.78
SSR3-209ENST00000498205 CAPZA1P52907 286 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 AP2S1P53680 142 aaPredicted RBP3.94□□□□□ -1.78
SSR3-209ENST00000498205 ARPC4P59998 168 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 LMO4P61968 165 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 IGLV3-21P80748 117 aaPredicted RBP3.94□□□□□ -1.78
SSR3-209ENST00000498205 CST6Q15828 149 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 ZNF141Q15928 474 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 MAPK14Q16539 360 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 SNAI3Q3KNW1 292 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 LRRC73Q5JTD7 316 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 OR2G6Q5TZ20 316 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 ZNF776Q68DI1 518 aaPredicted RBP3.94□□□□□ -1.78
SSR3-209ENST00000498205 SFXN4Q6P4A7 337 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 RPL22L1Q6P5R6 122 aaKnown RBP3.94□□□□□ -1.78
SSR3-209ENST00000498205 WDR88Q6ZMY6 472 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 ABHD13Q7L211 337 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 VN1R4Q7Z5H5 301 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 CATSPERDQ86XM0 798 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 MARCH9Q86YJ5 346 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 NRMQ8IXM6 262 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 TIGD4Q8IY51 512 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 SPICQ8N5J4 248 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 YIPF7Q8N8F6 280 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 Q8NBF4 154 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 FAM71CQ8NEG0 241 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 OR52E1Q8NGJ3 308 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 OR10G7Q8NGN6 311 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 OR4Q3Q8NH05 313 aa3.94□□□□□ -1.78
SSR3-209ENST00000498205 TMEM239Q8WW34 195 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms