RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 COQ7Q99807 217 aa19.01■□□□□ 0.63
CDKN2A-208ENST00000498124 ESM1Q9NQ30 184 aa19.01■□□□□ 0.63
CDKN2A-208ENST00000498124 TMEM106BQ9NUM4 274 aa19.01■□□□□ 0.63
CDKN2A-208ENST00000498124 CCDC182A6NF36 153 aa19■□□□□ 0.63
CDKN2A-208ENST00000498124 DLGAP1O14490 977 aa19■□□□□ 0.63
CDKN2A-208ENST00000498124 GATA3P23771 443 aa19■□□□□ 0.63
CDKN2A-208ENST00000498124 SNRPGP62308 76 aaKnown RBP19■□□□□ 0.63
CDKN2A-208ENST00000498124 CFAP77Q6ZQR2 320 aa19■□□□□ 0.63
CDKN2A-208ENST00000498124 BCDIN3DQ7Z5W3 292 aaKnown RBP19■□□□□ 0.63
CDKN2A-208ENST00000498124 CMBLQ96DG6 245 aa19■□□□□ 0.63
CDKN2A-208ENST00000498124 C7orf69Q9H7B7 122 aa19■□□□□ 0.63
CDKN2A-208ENST00000498124 RRP15Q9Y3B9 282 aaKnown RBP19■□□□□ 0.63
CDKN2A-208ENST00000498124 TMEM89A2RUT3 159 aa18.99■□□□□ 0.63
CDKN2A-208ENST00000498124 MPZL2O60487 215 aa18.99■□□□□ 0.63
CDKN2A-208ENST00000498124 TUBG1P23258 451 aa18.99■□□□□ 0.63
CDKN2A-208ENST00000498124 ACTG1P63261 375 aa18.99■□□□□ 0.63
CDKN2A-208ENST00000498124 TUSC1Q2TAM9 212 aa18.99■□□□□ 0.63
CDKN2A-208ENST00000498124 TTC23Q5W5X9 447 aa18.99■□□□□ 0.63
CDKN2A-208ENST00000498124 DPY19L4Q7Z388 723 aa18.99■□□□□ 0.63
CDKN2A-208ENST00000498124 DCXRQ7Z4W1 244 aa18.99■□□□□ 0.63
CDKN2A-208ENST00000498124 ZNF454Q8N9F8 522 aa18.99■□□□□ 0.63
CDKN2A-208ENST00000498124 DEFB108BQ8NET1 73 aa18.99■□□□□ 0.63
CDKN2A-208ENST00000498124 OR2Z1Q8NG97 314 aa18.99■□□□□ 0.63
CDKN2A-208ENST00000498124 NANPQ8TBE9 248 aa18.99■□□□□ 0.63
CDKN2A-208ENST00000498124 RFKQ969G6 155 aa18.99■□□□□ 0.63
CDKN2A-208ENST00000498124 MAP6Q96JE9 813 aa18.99■□□□□ 0.63
CDKN2A-208ENST00000498124 DCLRE1CQ96SD1 692 aaKnown RBP18.99■□□□□ 0.63
CDKN2A-208ENST00000498124 APOL4Q9BPW4 351 aa18.99■□□□□ 0.63
CDKN2A-208ENST00000498124 VCX3BQ9H321 246 aa18.99■□□□□ 0.63
CDKN2A-208ENST00000498124 MMP26Q9NRE1 261 aa18.99■□□□□ 0.63
CDKN2A-208ENST00000498124 TUBG2Q9NRH3 451 aa18.99■□□□□ 0.63
CDKN2A-208ENST00000498124 PPIAL4EA0A075B759 164 aa18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 PPIAL4CA0A0B4J2A2 164 aa18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 PPIAL4DF5H284 164 aa18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 SELENOFO60613 162 aa18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 DBHP09172 617 aa18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 PPIAL4FP0DN26 164 aa18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 HTR1FP30939 366 aa18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 RPS27P42677 84 aaKnown RBP18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 SEC61A1P61619 476 aaKnown RBP18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 TMED1Q13445 227 aa18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 ZMYND11Q15326 602 aa18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 SLC25A30Q5SVS4 291 aa18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 MEDAGQ5VYS4 303 aa18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 SLC16A9Q7RTY1 509 aa18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 DHRSXQ8N5I4 330 aa18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 ZDHHC22Q8N966 263 aa18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 ITLN1Q8WWA0 313 aa18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 CYGBQ8WWM9 190 aa18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 DVL3Q92997 716 aaPredicted RBP18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 UBE2FQ969M7 185 aa18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 HAVCR1Q96D42 359 aa18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 ZNF582Q96NG8 517 aaPredicted RBP18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 ATF6BQ99941 703 aa18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 PNRC2Q9NPJ4 139 aaKnown RBP18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 HAO2Q9NYQ3 351 aa18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 DNAJC27Q9NZQ0 273 aa18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 WARS2Q9UGM6 360 aaKnown RBP18.98■□□□□ 0.63
CDKN2A-208ENST00000498124 F5H0A9 414 aaPredicted RBP18.97■□□□□ 0.63
CDKN2A-208ENST00000498124 TRIM77I1YAP6 450 aa18.97■□□□□ 0.63
CDKN2A-208ENST00000498124 ATP6V1G2O95670 118 aa18.97■□□□□ 0.63
CDKN2A-208ENST00000498124 SBK2P0C263 348 aa18.97■□□□□ 0.63
CDKN2A-208ENST00000498124 PSKH1P11801 424 aa18.97■□□□□ 0.63
CDKN2A-208ENST00000498124 NAA10P41227 235 aaPredicted RBP18.97■□□□□ 0.63
CDKN2A-208ENST00000498124 EIF2B1Q14232 305 aaKnown RBP18.97■□□□□ 0.63
CDKN2A-208ENST00000498124 TMEM155Q4W5P6 130 aa18.97■□□□□ 0.63
CDKN2A-208ENST00000498124 OTOSQ8NHW6 89 aa18.97■□□□□ 0.63
CDKN2A-208ENST00000498124 ST7LQ8TDW4 575 aa18.97■□□□□ 0.63
CDKN2A-208ENST00000498124 NRG4Q8WWG1 115 aa18.97■□□□□ 0.63
CDKN2A-208ENST00000498124 CNN2Q99439 309 aaKnown RBP18.97■□□□□ 0.63
CDKN2A-208ENST00000498124 SUCNR1Q9BXA5 334 aa18.97■□□□□ 0.63
CDKN2A-208ENST00000498124 YIPF3Q9GZM5 350 aa18.97■□□□□ 0.63
CDKN2A-208ENST00000498124 PATZ1Q9HBE1 687 aaKnown RBP18.97■□□□□ 0.63
CDKN2A-208ENST00000498124 POLR3KQ9Y2Y1 108 aaPredicted RBP18.97■□□□□ 0.63
CDKN2A-208ENST00000498124 SNTNA6NMZ2 147 aa18.96■□□□□ 0.63
CDKN2A-208ENST00000498124 TRAPPC2LH3BP13 241 aa18.96■□□□□ 0.63
CDKN2A-208ENST00000498124 FOXH1O75593 365 aa18.96■□□□□ 0.63
CDKN2A-208ENST00000498124 MMP16P51512 607 aa18.96■□□□□ 0.63
CDKN2A-208ENST00000498124 BTG1P62324 171 aa18.96■□□□□ 0.63
CDKN2A-208ENST00000498124 HLXQ14774 488 aaPredicted RBP18.96■□□□□ 0.63
CDKN2A-208ENST00000498124 TAF13Q15543 124 aa18.96■□□□□ 0.63
CDKN2A-208ENST00000498124 OCLNQ16625 522 aa18.96■□□□□ 0.63
CDKN2A-208ENST00000498124 LRRC28Q86X40 367 aaPredicted RBP18.96■□□□□ 0.63
CDKN2A-208ENST00000498124 SPICQ8N5J4 248 aa18.96■□□□□ 0.63
CDKN2A-208ENST00000498124 C22orf15Q8WYQ4 148 aa18.96■□□□□ 0.63
CDKN2A-208ENST00000498124 SPTSSAQ969W0 71 aa18.96■□□□□ 0.63
CDKN2A-208ENST00000498124 SLAMF6Q96DU3 332 aa18.96■□□□□ 0.63
CDKN2A-208ENST00000498124 OR2V2Q96R30 315 aa18.96■□□□□ 0.63
CDKN2A-208ENST00000498124 ADI1Q9BV57 179 aa18.96■□□□□ 0.63
CDKN2A-208ENST00000498124 DDX28Q9NUL7 540 aaKnown RBP18.96■□□□□ 0.63
CDKN2A-208ENST00000498124 IL19Q9UHD0 177 aa18.96■□□□□ 0.63
CDKN2A-208ENST00000498124 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.96■□□□□ 0.63
CDKN2A-208ENST00000498124 MEGF8Q7Z7M0 2845 aa18.96■□□□□ 0.63
CDKN2A-208ENST00000498124 MGAM2Q2M2H8 2515 aa18.95■□□□□ 0.62
CDKN2A-208ENST00000498124 A8MXK9 166 aa18.95■□□□□ 0.62
CDKN2A-208ENST00000498124 H0YAE9 185 aa18.95■□□□□ 0.62
CDKN2A-208ENST00000498124 H0YJX3 145 aa18.95■□□□□ 0.62
CDKN2A-208ENST00000498124 MRPL3P09001 348 aaKnown RBP18.95■□□□□ 0.62
CDKN2A-208ENST00000498124 RAC2P15153 192 aa18.95■□□□□ 0.62
CDKN2A-208ENST00000498124 TNFRSF1AP19438 455 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms