RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 TMEM82A0PJX8 343 aa11.48□□□□□ -0.57
GARNL3-220ENST00000496711 OR5H15A6NDH6 313 aa11.48□□□□□ -0.57
GARNL3-220ENST00000496711 C9orf172C9J069 976 aa11.48□□□□□ -0.57
GARNL3-220ENST00000496711 ERVH48-1M5A8F1 160 aa11.48□□□□□ -0.57
GARNL3-220ENST00000496711 ZNF735P0CB33 412 aa11.48□□□□□ -0.57
GARNL3-220ENST00000496711 OR3A4PP47883 348 aa11.48□□□□□ -0.57
GARNL3-220ENST00000496711 CYB561P49447 251 aa11.48□□□□□ -0.57
GARNL3-220ENST00000496711 MRPS34P82930 218 aaKnown RBP11.48□□□□□ -0.57
GARNL3-220ENST00000496711 DHODHQ02127 395 aa11.48□□□□□ -0.57
GARNL3-220ENST00000496711 GLIPR1L1Q6UWM5 242 aa11.48□□□□□ -0.57
GARNL3-220ENST00000496711 MUC20Q8N307 709 aaPredicted RBP11.48□□□□□ -0.57
GARNL3-220ENST00000496711 BPIFB2Q8N4F0 458 aa11.48□□□□□ -0.57
GARNL3-220ENST00000496711 OR10R2Q8NGX6 335 aa11.48□□□□□ -0.57
GARNL3-220ENST00000496711 LOXL4Q96JB6 756 aa11.48□□□□□ -0.57
GARNL3-220ENST00000496711 SPACA5Q96QH8 159 aa11.48□□□□□ -0.57
GARNL3-220ENST00000496711 SPRY4Q9C004 299 aa11.48□□□□□ -0.57
GARNL3-220ENST00000496711 ALX4Q9H161 411 aaPredicted RBP11.48□□□□□ -0.57
GARNL3-220ENST00000496711 POFUT1Q9H488 388 aa11.48□□□□□ -0.57
GARNL3-220ENST00000496711 FLVCR1Q9Y5Y0 555 aa11.48□□□□□ -0.57
GARNL3-220ENST00000496711 DISC1C4P0D8 188 aa11.47□□□□□ -0.57
GARNL3-220ENST00000496711 E9PLN8 166 aa11.47□□□□□ -0.57
GARNL3-220ENST00000496711 F5H5K5 113 aa11.47□□□□□ -0.57
GARNL3-220ENST00000496711 APOC1P02654 83 aa11.47□□□□□ -0.57
GARNL3-220ENST00000496711 RFPL3SP0C7P2 107 aa11.47□□□□□ -0.57
GARNL3-220ENST00000496711 OTX1P32242 354 aaPredicted RBP11.47□□□□□ -0.57
GARNL3-220ENST00000496711 THBS4P35443 961 aa11.47□□□□□ -0.57
GARNL3-220ENST00000496711 CARD18P57730 90 aa11.47□□□□□ -0.57
GARNL3-220ENST00000496711 OC90Q02509 493 aaPredicted RBP11.47□□□□□ -0.57
GARNL3-220ENST00000496711 ZMYND11Q15326 602 aa11.47□□□□□ -0.57
GARNL3-220ENST00000496711 CDNFQ49AH0 187 aa11.47□□□□□ -0.57
GARNL3-220ENST00000496711 C4orf46Q504U0 113 aa11.47□□□□□ -0.57
GARNL3-220ENST00000496711 TEX261Q6UWH6 196 aa11.47□□□□□ -0.57
GARNL3-220ENST00000496711 RNF144BQ7Z419 303 aa11.47□□□□□ -0.57
GARNL3-220ENST00000496711 OR2AK2Q8NG84 335 aa11.47□□□□□ -0.57
GARNL3-220ENST00000496711 NUDCD2Q8WVJ2 157 aa11.47□□□□□ -0.57
GARNL3-220ENST00000496711 TNFAIP8L1Q8WVP5 186 aa11.47□□□□□ -0.57
GARNL3-220ENST00000496711 LYZL4Q96KX0 146 aa11.47□□□□□ -0.57
GARNL3-220ENST00000496711 C1orf147Q96MC9 270 aaPredicted RBP11.47□□□□□ -0.57
GARNL3-220ENST00000496711 HEXA-AS1Q9H8Q6 139 aa11.47□□□□□ -0.57
GARNL3-220ENST00000496711 DEPPQ9NTK1 212 aa11.47□□□□□ -0.57
GARNL3-220ENST00000496711 MRPS18CQ9Y3D5 142 aaKnown RBP11.47□□□□□ -0.57
GARNL3-220ENST00000496711 U3KQ87 197 aa11.47□□□□□ -0.57
GARNL3-220ENST00000496711 C5orf63A6NC05 138 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 ZNF716A6NP11 495 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 M0R135 149 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 DHRS3O75911 302 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 CHRM2P08172 466 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 UBBP0CG47 229 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 POU3F2P20265 443 aaPredicted RBP11.46□□□□□ -0.57
GARNL3-220ENST00000496711 GDF1P27539 372 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 SSTR2P30874 369 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 GNG2P59768 71 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 RNASE10Q5GAN6 216 aaKnown RBP11.46□□□□□ -0.57
GARNL3-220ENST00000496711 WIPI1Q5MNZ9 446 aaPredicted RBP11.46□□□□□ -0.57
GARNL3-220ENST00000496711 PLA2G2CQ5R387 149 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 FAM27BQ5VT28 67 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 ABLIM2Q6H8Q1 611 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 NAXDQ8IW45 347 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 GPR137CQ8N3F9 429 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 OR4S1Q8NGB4 309 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 OR2V1Q8NHB1 315 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 KCNG3Q8TAE7 436 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 SSC4DQ8WTU2 575 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 SPTSSAQ969W0 71 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 ZNF799Q96GE5 643 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 ADGRG7Q96K78 797 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 GPER1Q99527 375 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 PRRT1Q99946 306 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 NICN1Q9BSH3 213 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 LPAR5Q9H1C0 372 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 CLEC4MQ9H2X3 399 aaPredicted RBP11.46□□□□□ -0.57
GARNL3-220ENST00000496711 MYOZ1Q9NP98 299 aaPredicted RBP11.46□□□□□ -0.57
GARNL3-220ENST00000496711 IFT46Q9NQC8 304 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 SLC2A8Q9NY64 477 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 PLEK2Q9NYT0 353 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 FOXJ2Q9P0K8 574 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 V9GYS6 101 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 FRYLO94915 3013 aa11.46□□□□□ -0.57
GARNL3-220ENST00000496711 KMT2EQ8IZD2 1858 aa11.46□□□□□ -0.58
GARNL3-220ENST00000496711 IGKV1-9A0A0C4DH69 117 aa11.46□□□□□ -0.58
GARNL3-220ENST00000496711 GOSR2O14653 212 aa11.46□□□□□ -0.58
GARNL3-220ENST00000496711 CXCL13O43927 109 aa11.46□□□□□ -0.58
GARNL3-220ENST00000496711 CDC14BO60729 498 aa11.46□□□□□ -0.58
GARNL3-220ENST00000496711 TRAPPC6AO75865 159 aa11.46□□□□□ -0.58
GARNL3-220ENST00000496711 MPIG6BO95866 241 aa11.46□□□□□ -0.58
GARNL3-220ENST00000496711 CD59P13987 128 aa11.46□□□□□ -0.58
GARNL3-220ENST00000496711 GNB3P16520 340 aa11.46□□□□□ -0.58
GARNL3-220ENST00000496711 MPZP25189 248 aa11.46□□□□□ -0.58
GARNL3-220ENST00000496711 UBE2MP61081 183 aaKnown RBP11.46□□□□□ -0.58
GARNL3-220ENST00000496711 ECH1Q13011 328 aa11.46□□□□□ -0.58
GARNL3-220ENST00000496711 RAB35Q15286 201 aa11.46□□□□□ -0.58
GARNL3-220ENST00000496711 FAM189A2Q15884 450 aa11.46□□□□□ -0.58
GARNL3-220ENST00000496711 SCGB2B2Q4G0G5 96 aa11.46□□□□□ -0.58
GARNL3-220ENST00000496711 NAA40Q86UY6 237 aa11.46□□□□□ -0.58
GARNL3-220ENST00000496711 PNLDC1Q8NA58 520 aaKnown RBP11.46□□□□□ -0.58
GARNL3-220ENST00000496711 CCDC54Q8NEL0 328 aa11.46□□□□□ -0.58
GARNL3-220ENST00000496711 ZNF680Q8NEM1 530 aa11.46□□□□□ -0.58
GARNL3-220ENST00000496711 PSMF1Q92530 271 aa11.46□□□□□ -0.58
GARNL3-220ENST00000496711 FBXO17Q96EF6 278 aa11.46□□□□□ -0.58
GARNL3-220ENST00000496711 THOC3Q96J01 351 aaKnown RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms