RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 GABRR2P28476 465 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 ADORA2BP29275 332 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 GTF2H1P32780 548 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 RPL4P36578 427 aaKnown RBP3.55□□□□□ -1.84
SF3B1-212ENST00000496458 EMP2P54851 167 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 GNG2P59768 71 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 UBE2G2P60604 165 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 NCALDP61601 193 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 TLE4Q04727 773 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 KDSRQ06136 332 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 EGFEM1PQ0D2K5 195 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 SCRN3Q0VDG4 424 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 ZNF154Q13106 437 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 ALX1Q15699 326 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 TSC22D1Q15714 1073 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 TTMPQ5BVD1 217 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 TIGD3Q6B0B8 471 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 RWDD4Q6NW29 188 aaKnown RBP3.55□□□□□ -1.84
SF3B1-212ENST00000496458 PRMT9Q6P2P2 845 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 SYS1Q8N2H4 156 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 MMGT1Q8N4V1 131 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 TPRX1Q8N7U7 411 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 TTC29Q8NA56 475 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-212ENST00000496458 CDC26Q8NHZ8 85 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 DCUN1D4Q92564 292 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 ZNF670Q9BS34 389 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 NAT9Q9BTE0 207 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 KIR3DX1Q9H7L2 352 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 MARCH5Q9NX47 278 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 IL37Q9NZH6 218 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 MRM2Q9UI43 246 aaKnown RBP3.55□□□□□ -1.84
SF3B1-212ENST00000496458 NAGKQ9UJ70 344 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 SCML1Q9UN30 329 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 SLC17A4Q9Y2C5 497 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 DLEC1Q9Y238 1755 aa3.55□□□□□ -1.84
SF3B1-212ENST00000496458 DDX60Q8IY21 1712 aaKnown RBP3.55□□□□□ -1.84
SF3B1-212ENST00000496458 TNRC6CQ9HCJ0 1690 aaKnown RBP3.55□□□□□ -1.84
SF3B1-212ENST00000496458 DICER1Q9UPY3 1922 aaKnown RBP3.54□□□□□ -1.84
SF3B1-212ENST00000496458 FER1L6Q2WGJ9 1857 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 A0A1B0GW15 77 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 TMEM213A2RRL7 107 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 TMEM210A6NLX4 147 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 CENPXA8MT69 81 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 SLC9A3R1O14745 358 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-212ENST00000496458 CXCL13O43927 109 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 HSBP1O75506 76 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 PLEKHA8P1O95397 391 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 ASS1P00966 412 aaKnown RBP3.54□□□□□ -1.84
SF3B1-212ENST00000496458 KRT7P08729 469 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 TNFSF9P41273 254 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 GPR1P46091 355 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 EIF2B2P49770 351 aaKnown RBP3.54□□□□□ -1.84
SF3B1-212ENST00000496458 LIM2P55344 173 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 RND3P61587 244 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 MRPS22P82650 360 aaKnown RBP3.54□□□□□ -1.84
SF3B1-212ENST00000496458 FADDQ13158 208 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 DPYSL3Q14195 570 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 LAGE3Q14657 143 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 KCNJ8Q15842 424 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 TIGITQ495A1 244 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 C5orf47Q569G3 176 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 SAPCD1Q5SSQ6 148 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 ZNF691Q5VV52 312 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 MFSD14CQ5VZR4 134 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 PLEKHG7Q6ZR37 379 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 PEX26Q7Z412 305 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 DCXRQ7Z4W1 244 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 IFNEQ86WN2 208 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 STX12Q86Y82 276 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 OR2L13Q8N349 312 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 DCAF4L2Q8NA75 395 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 OR56A4Q8NGH8 313 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 TEX47Q8TBZ9 253 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 TMEM239Q8WW34 195 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 ING5Q8WYH8 240 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 ECSITQ9BQ95 431 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 SLC35A5Q9BS91 424 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 C9orf16Q9BUW7 83 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 SLC25A39Q9BZJ4 359 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-212ENST00000496458 NTN4Q9HB63 628 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 PAQR5Q9NXK6 330 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-212ENST00000496458 OR1A1Q9P1Q5 309 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 WRAP73Q9P2S5 460 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-212ENST00000496458 AP3M1Q9Y2T2 418 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 SAR1BQ9Y6B6 198 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 URGCP-MRPS24S4R325 110 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 SPEF2Q9C093 1822 aa3.54□□□□□ -1.84
SF3B1-212ENST00000496458 RIC1Q4ADV7 1423 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 ADGRA3Q8IWK6 1321 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 A0A1W2PRF3 423 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 A0A1W2PRM7 423 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 MKRN2OSH3BPM6 223 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 ACOX3O15254 700 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 AQP9O43315 295 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 XRCC2O43543 280 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 SNAI2O43623 268 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 GATCO43716 136 aaKnown RBP3.53□□□□□ -1.84
SF3B1-212ENST00000496458 UGT2B17O75795 530 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 RBBP9O75884 186 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 SNAPINO95295 136 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms