RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 CFL1P23528 166 aaKnown RBP13.18□□□□□ -0.3
HDAC4-213ENST00000496347 POU1F1P28069 291 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 DDOSTP39656 456 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 OPRL1P41146 370 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 PRKXP51817 358 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 HILS1P60008 231 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 SEC61A1P61619 476 aaKnown RBP13.18□□□□□ -0.3
HDAC4-213ENST00000496347 MZT1Q08AG7 82 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 TIGD4Q8IY51 512 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 ZNF454Q8N9F8 522 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 SPERTQ8NA61 448 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 OR56B2PQ8NGI1 322 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 OR52H1Q8NGJ2 320 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 OTULINQ96BN8 352 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 NRBF2Q96F24 287 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 PLEKHA8Q96JA3 519 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 MRI1Q9BV20 369 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 ABHD6Q9BV23 337 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 SUCNR1Q9BXA5 334 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 RGCCQ9H4X1 137 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 MED20Q9H944 212 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 FN3KRPQ9HA64 309 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 SLC25A19Q9HC21 320 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 KIF17Q9P2E2 1029 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 MIOXQ9UGB7 285 aa13.18□□□□□ -0.3
HDAC4-213ENST00000496347 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.17□□□□□ -0.3
HDAC4-213ENST00000496347 IGHV3-64DA0A0J9YX35 117 aa13.17□□□□□ -0.3
HDAC4-213ENST00000496347 FAM20BO75063 409 aa13.17□□□□□ -0.3
HDAC4-213ENST00000496347 ANXA2P07355 339 aaKnown RBP13.17□□□□□ -0.3
HDAC4-213ENST00000496347 ANOS1P23352 680 aa13.17□□□□□ -0.3
HDAC4-213ENST00000496347 RBMXP38159 391 aaKnown RBP13.17□□□□□ -0.3
HDAC4-213ENST00000496347 CDK5Q00535 292 aa13.17□□□□□ -0.3
HDAC4-213ENST00000496347 ZNF154Q13106 437 aa13.17□□□□□ -0.3
HDAC4-213ENST00000496347 GINS1Q14691 196 aa13.17□□□□□ -0.3
HDAC4-213ENST00000496347 TIGD6Q17RP2 521 aa13.17□□□□□ -0.3
HDAC4-213ENST00000496347 ARMCX4Q5H9R4 360 aa13.17□□□□□ -0.3
HDAC4-213ENST00000496347 SLC35D3Q5M8T2 416 aa13.17□□□□□ -0.3
HDAC4-213ENST00000496347 PLBD1Q6P4A8 553 aa13.17□□□□□ -0.3
HDAC4-213ENST00000496347 DCDC5Q6ZRR9 648 aa13.17□□□□□ -0.3
HDAC4-213ENST00000496347 SPATC1Q76KD6 591 aa13.17□□□□□ -0.3
HDAC4-213ENST00000496347 HS3ST5Q8IZT8 346 aa13.17□□□□□ -0.3
HDAC4-213ENST00000496347 PARP8Q8N3A8 854 aa13.17□□□□□ -0.3
HDAC4-213ENST00000496347 BPIFB2Q8N4F0 458 aa13.17□□□□□ -0.3
HDAC4-213ENST00000496347 OR8B3Q8NGG8 313 aa13.17□□□□□ -0.3
HDAC4-213ENST00000496347 NEIL1Q96FI4 390 aaPredicted RBP13.17□□□□□ -0.3
HDAC4-213ENST00000496347 OR8B2Q96RD0 313 aa13.17□□□□□ -0.3
HDAC4-213ENST00000496347 TMEM165Q9HC07 324 aa13.17□□□□□ -0.3
HDAC4-213ENST00000496347 INSIG2Q9Y5U4 225 aa13.17□□□□□ -0.3
HDAC4-213ENST00000496347 C5orf63A6NC05 138 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 PHYHO14832 338 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 VENTXO95231 258 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 WNT2P09544 360 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 PPIAL4GP0DN37 164 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 PMELP40967 661 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 RASSF2P50749 326 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 BNIP1Q12981 228 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 KCNJ8Q15842 424 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 PRAMEF6Q5VXH4 476 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 SLC16A9Q7RTY1 509 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 PRSS45Q7RTY3 260 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 FTMTQ8N4E7 242 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 OTOSQ8NHW6 89 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 ZMYND19Q96E35 227 aaPredicted RBP13.16□□□□□ -0.3
HDAC4-213ENST00000496347 TMEM246Q9BRR3 403 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 PRRG3Q9BZD7 231 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 OR51V1Q9H2C8 321 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 TRIM36Q9NQ86 728 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 MMP26Q9NRE1 261 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 PAPOLBQ9NRJ5 636 aaKnown RBP13.16□□□□□ -0.3
HDAC4-213ENST00000496347 C14orf119Q9NWQ9 140 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 PPIAL4AQ9Y536 164 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 AUP1Q9Y679 476 aa13.16□□□□□ -0.3
HDAC4-213ENST00000496347 hCG_38984A0A1B0GV85 526 aa13.15□□□□□ -0.3
HDAC4-213ENST00000496347 ANKRD30BLA7E2S9 258 aa13.15□□□□□ -0.3
HDAC4-213ENST00000496347 TRAPPC2LH3BP13 241 aa13.15□□□□□ -0.3
HDAC4-213ENST00000496347 TBX1O43435 398 aa13.15□□□□□ -0.3
HDAC4-213ENST00000496347 LYNP07948 512 aa13.15□□□□□ -0.3
HDAC4-213ENST00000496347 SLC2A5P22732 501 aa13.15□□□□□ -0.3
HDAC4-213ENST00000496347 PITPNBP48739 271 aa13.15□□□□□ -0.3
HDAC4-213ENST00000496347 ZNF121P58317 390 aaPredicted RBP13.15□□□□□ -0.3
HDAC4-213ENST00000496347 PSMA6P60900 246 aaKnown RBP13.15□□□□□ -0.3
HDAC4-213ENST00000496347 GNB2P62879 340 aa13.15□□□□□ -0.3
HDAC4-213ENST00000496347 MPPED2Q15777 294 aa13.15□□□□□ -0.3
HDAC4-213ENST00000496347 SNCBQ16143 134 aa13.15□□□□□ -0.3
HDAC4-213ENST00000496347 FAHD1Q6P587 224 aa13.15□□□□□ -0.3
HDAC4-213ENST00000496347 BTNL3Q6UXE8 466 aa13.15□□□□□ -0.3
HDAC4-213ENST00000496347 DACT3Q96B18 629 aaPredicted RBP13.15□□□□□ -0.3
HDAC4-213ENST00000496347 REEP6Q96HR9 211 aa13.15□□□□□ -0.3
HDAC4-213ENST00000496347 SLC6A7Q99884 636 aa13.15□□□□□ -0.3
HDAC4-213ENST00000496347 CADM1Q9BY67 442 aaKnown RBP13.15□□□□□ -0.3
HDAC4-213ENST00000496347 OR10A2Q9H208 303 aa13.15□□□□□ -0.3
HDAC4-213ENST00000496347 UFSP2Q9NUQ7 469 aa13.15□□□□□ -0.3
HDAC4-213ENST00000496347 RNF7Q9UBF6 113 aa13.15□□□□□ -0.3
HDAC4-213ENST00000496347 ZNF391Q9UJN7 358 aa13.15□□□□□ -0.3
HDAC4-213ENST00000496347 NBEAL1Q6ZS30 2694 aa13.15□□□□□ -0.31
HDAC4-213ENST00000496347 IGHV2-70DA0A0C4DH43 119 aa13.14□□□□□ -0.31
HDAC4-213ENST00000496347 GSC2O15499 205 aa13.14□□□□□ -0.31
HDAC4-213ENST00000496347 SELENOFO60613 162 aa13.14□□□□□ -0.31
HDAC4-213ENST00000496347 ZNF205O95201 554 aa13.14□□□□□ -0.31
HDAC4-213ENST00000496347 H2BFMP0C1H6 154 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms