RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 SPRYD4Q8WW59 207 aaPredicted RBP10.34□□□□□ -0.75
TRIM59-207ENST00000496222 CENPNQ96H22 339 aaPredicted RBP10.34□□□□□ -0.75
TRIM59-207ENST00000496222 GAL3ST1Q99999 423 aa10.34□□□□□ -0.75
TRIM59-207ENST00000496222 TMPRSS13Q9BYE2 586 aa10.34□□□□□ -0.75
TRIM59-207ENST00000496222 PATZ1Q9HBE1 687 aaKnown RBP10.34□□□□□ -0.75
TRIM59-207ENST00000496222 TMEM165Q9HC07 324 aa10.34□□□□□ -0.75
TRIM59-207ENST00000496222 KRT84Q9NSB2 600 aa10.34□□□□□ -0.75
TRIM59-207ENST00000496222 MRPL15Q9P015 296 aaKnown RBP10.34□□□□□ -0.75
TRIM59-207ENST00000496222 KIF17Q9P2E2 1029 aa10.34□□□□□ -0.75
TRIM59-207ENST00000496222 POLR3KQ9Y2Y1 108 aaPredicted RBP10.34□□□□□ -0.75
TRIM59-207ENST00000496222 hCG_38984A0A1B0GV85 526 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 ISPDA4D126 451 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 E9PQ18 207 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 XRCC2O43543 280 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 GMDSO60547 372 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 ZNF205O95201 554 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 CYB5R3P00387 301 aaPredicted RBP10.33□□□□□ -0.76
TRIM59-207ENST00000496222 LYNP07948 512 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 FCGR1AP12314 374 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 PCMT1P22061 227 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 HOXA4Q00056 320 aaPredicted RBP10.33□□□□□ -0.76
TRIM59-207ENST00000496222 KPNB1Q14974 876 aaKnown RBP10.33□□□□□ -0.76
TRIM59-207ENST00000496222 FAM201AQ5SY85 155 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 PRAMEF6Q5VXH4 476 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 THEM6Q8WUY1 208 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 PYDC1Q8WXC3 89 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 DVL3Q92997 716 aaPredicted RBP10.33□□□□□ -0.76
TRIM59-207ENST00000496222 PLEKHA8Q96JA3 519 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 CIB1Q99828 191 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 OSBPL10Q9BXB5 764 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 YIPF3Q9GZM5 350 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 SLC22A4Q9H015 551 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 SEMA6AQ9H2E6 1030 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 OPA3Q9H6K4 179 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 PPP1R3EQ9H7J1 279 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 UBAP1Q9NZ09 502 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 DNAJC27Q9NZQ0 273 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 OPN4Q9UHM6 478 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 OAZ3Q9UMX2 235 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 N6AMT1Q9Y5N5 214 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 STAB1Q9NY15 2570 aa10.33□□□□□ -0.76
TRIM59-207ENST00000496222 PPIAL4EA0A075B759 164 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 PPIAL4CA0A0B4J2A2 164 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 GGT3PA6NGU5 568 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 CEACAM18A8MTB9 384 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 A8MXK9 166 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 PPIAL4DF5H284 164 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 TRAPPC2LH3BP13 241 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 TNFRSF13BO14836 293 aaPredicted RBP10.32□□□□□ -0.76
TRIM59-207ENST00000496222 PHF1O43189 567 aaPredicted RBP10.32□□□□□ -0.76
TRIM59-207ENST00000496222 PNPP00491 289 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 APOC1P02654 83 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 ANXA2P07355 339 aaKnown RBP10.32□□□□□ -0.76
TRIM59-207ENST00000496222 WNT2P09544 360 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 H2BFMP0C1H6 154 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 PPIAL4FP0DN26 164 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 HSD11B1P28845 292 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 MDH2P40926 338 aaKnown RBP10.32□□□□□ -0.76
TRIM59-207ENST00000496222 LCN2P80188 198 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 PAX2Q02962 417 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 OR8G1Q15617 311 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 LRRN1Q6UXK5 716 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 FAM57BQ71RH2 274 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 WDR86Q86TI4 376 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 C11orf53Q8IXP5 236 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 SPICQ8N5J4 248 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 TCEANCQ8N8B7 351 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 PLPP7Q8NBV4 271 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 OR52H1Q8NGJ2 320 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 TMEM163Q8TC26 289 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 ERGIC1Q969X5 290 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 REEP6Q96HR9 211 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 LYZL4Q96KX0 146 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 PKP2Q99959 881 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 TMEM246Q9BRR3 403 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 ADAT1Q9BUB4 502 aaKnown RBP10.32□□□□□ -0.76
TRIM59-207ENST00000496222 TEX12Q9BXU0 123 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 GABARAPL3Q9BY60 117 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 MMP26Q9NRE1 261 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 COPS3Q9UNS2 423 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 LRP12Q9Y561 859 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 ANK2Q01484 3957 aa10.32□□□□□ -0.76
TRIM59-207ENST00000496222 DOCK11Q5JSL3 2073 aa10.31□□□□□ -0.76
TRIM59-207ENST00000496222 TBX1O43435 398 aa10.31□□□□□ -0.76
TRIM59-207ENST00000496222 FAM20BO75063 409 aa10.31□□□□□ -0.76
TRIM59-207ENST00000496222 CIB2O75838 187 aa10.31□□□□□ -0.76
TRIM59-207ENST00000496222 FSHBP01225 129 aa10.31□□□□□ -0.76
TRIM59-207ENST00000496222 MRPL3P09001 348 aaKnown RBP10.31□□□□□ -0.76
TRIM59-207ENST00000496222 ACKR3P25106 362 aa10.31□□□□□ -0.76
TRIM59-207ENST00000496222 DDOSTP39656 456 aa10.31□□□□□ -0.76
TRIM59-207ENST00000496222 GSK3AP49840 483 aa10.31□□□□□ -0.76
TRIM59-207ENST00000496222 RPS7P62081 194 aaKnown RBP10.31□□□□□ -0.76
TRIM59-207ENST00000496222 SRSF2Q01130 221 aaKnown RBP10.31□□□□□ -0.76
TRIM59-207ENST00000496222 ROM1Q03395 351 aa10.31□□□□□ -0.76
TRIM59-207ENST00000496222 OR8B8Q15620 311 aa10.31□□□□□ -0.76
TRIM59-207ENST00000496222 ZNF404Q494X3 552 aa10.31□□□□□ -0.76
TRIM59-207ENST00000496222 NXNL2Q5VZ03 156 aa10.31□□□□□ -0.76
TRIM59-207ENST00000496222 FAHD2BQ6P2I3 314 aaPredicted RBP10.31□□□□□ -0.76
TRIM59-207ENST00000496222 DEGS2Q6QHC5 323 aa10.31□□□□□ -0.76
TRIM59-207ENST00000496222 CCDC121Q6ZUS5 278 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms